Gimesia benthica: F1728_03090
Help
Entry
F1728_03090 CDS
T06296
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gim
Gimesia benthica
Pathway
gim00300
Lysine biosynthesis
gim00470
D-Amino acid metabolism
gim01100
Metabolic pathways
gim01110
Biosynthesis of secondary metabolites
gim01120
Microbial metabolism in diverse environments
gim01230
Biosynthesis of amino acids
Module
gim_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1728_03090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F1728_03090 (lysA)
Enzymes [BR:
gim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F1728_03090 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QGQ21731
UniProt:
A0A6I6A9P9
LinkDB
All DBs
Position
781984..783255
Genome browser
AA seq
423 aa
AA seq
DB search
MTAFHYQNDELFCENVPVAQLAEEFGTPLWIYSKSAFLGRLKEIQDAFAEVDPVICYSVK
ANGNLSILKTMNDAGSSFDVVSGGELFRVKQAGADTTRVVFAGVGKTDEEIRQALQADIL
MFDVESEAELDAIAAIAGELGCVGRVALRLNPDIDAKTHHKTTTGKKGNKFGMDIERATE
LADKVLKDDRLELTGIHMHLGSPILSTDPYAKAVKKGAEVIQQLRDKGHNTNWMNLGGGF
GISYKTDEGPSAQTYADVIVPTIKEIGCRLALEPGRFIAGNSGILVSQIVFTKREGGKLF
YIQDGGMTDLVRPAMYDSYHRVWPVKPKVPMPFDCEGEIAGCEPADVVGPVCESCDYFAK
DRYLPPMERGDYLCMFSAGAYGSVMSSNYNARPRSAEILVDGSDYQVIRRRETYEELIAL
EQA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctttcattaccaaaacgatgaactgttctgtgaaaatgtccctgttgcccaa
ctggcagaagaatttggaactccgctctggatctactccaaatcagctttcctgggacgg
ttaaaagagattcaggatgcgttcgccgaagtcgatccggtcatctgctactccgtcaaa
gcgaatggcaacctgagcattctcaagaccatgaacgacgccggcagcagtttcgacgtc
gtttccggtggggaactgttccgggtaaaacaggctggtgcagacacgacacgtgtggtc
ttcgcgggagttggtaagacggacgaagaaatccgccaggctctccaagccgatattctg
atgttcgatgttgagagtgaagccgaactggatgcgatcgctgccatcgcgggagagttg
ggctgcgtcggtcgggtcgcactgcgtctcaaccctgatatcgatgcgaaaacacaccac
aaaaccacgaccggtaaaaagggcaacaagttcggtatggacatcgaacgggccaccgaa
ctggcagataaggttctcaaagatgatcgtctcgagctgaccggcatccatatgcacctt
ggttcgccgatcctttcgaccgatccgtatgccaaagcggttaaaaagggagctgaagtc
attcagcagctgcgggataaaggccataacaccaactggatgaatctgggtggtggtttt
gggatcagctacaaaacggatgaaggcccttccgcacagacttatgccgacgtgatcgtt
cctacaatcaaggagatcggctgtcgtctggctctggaacccggacgtttcatcgccgga
aactcaggcatcctggtcagccagatcgtcttcaccaagcgggaagggggcaagttgttc
tatatccaggatggcggcatgaccgatctcgtccgccccgcgatgtatgactcctatcat
cgcgtctggcccgtcaaacccaaggtgcccatgccctttgactgtgaaggcgaaatcgca
ggctgcgagcctgcagacgtcgtgggtccggtttgcgagtcctgcgattatttcgccaaa
gatcgctatctgcctcccatggaacggggcgactatctctgcatgttcagcgcgggtgcg
tatggttctgtgatgagcagcaactacaatgcccgcccccgtagtgcagaaatactggtg
gatggcagcgactatcaggttattcgccgtcgcgaaacctacgaagagctgatcgcgctc
gaacaggcttaa
DBGET
integrated database retrieval system