Gimesia benthica: F1728_06030
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Entry
F1728_06030 CDS
T06296
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
gim
Gimesia benthica
Pathway
gim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F1728_06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gim03021
]
F1728_06030
Transcription machinery [BR:
gim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1728_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
HTH_10
Enamelin
Spectrin_3
Motif
Other DBs
NCBI-ProteinID:
QGQ22262
UniProt:
A0A6I6A9L2
LinkDB
All DBs
Position
complement(1596368..1597315)
Genome browser
AA seq
315 aa
AA seq
DB search
MIVCSKDHCKQSSHQLAERARKILQAEIDFIPNPSFQDSDADELILGQPLPESKSEIPTA
AFTKPGSRALSTQIARLCRSEVLSAADEQDLFRRMNYLKFKANMHRCKLDPEEVEPCELE
RIENLLQQAEQVRDQIFRSNMRLVVSIVKKCVTPGVSFDELLSDGCLTLMNAIEKFDYAR
GFRFSTYAYHSISNYAYRKIANRRKERNKFKQLGEERTLEELQEQKNPMMVRAVWDELSD
LLKQTIDTLDQREQFIVRSRFALGKHRKIQTFQKLADELGISKERVRQLEQRAVAKLRAL
AEGSRLDAIRELVGG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagtatgttcaaaagatcattgtaagcagtcatcacatcagctggcagaacgtgct
cgtaagatcctgcaggctgaaatcgacttcatcccgaatcccagctttcaggattcagac
gcagacgaactaattctggggcaacccttgcctgagagtaaatcagagattccaactgct
gccttcacgaaaccgggcagccgggcactctcgactcaaatcgcccgtctctgccgctca
gaagtactgtctgcagctgacgagcaggatctgttccgcaggatgaactacctcaagttc
aaagccaatatgcatcgttgcaaactagacccggaggaggtcgagccctgcgagctggag
cgaatcgaaaatctgctccagcaggcagaacaggttcgcgaccagatctttcgcagtaat
atgcgactggtggtctcgatcgtcaagaaatgtgtgactcctggcgtgagctttgacgag
ctactgagtgatggctgcctcacgctgatgaatgccatcgaaaagttcgattatgcacgg
ggattccgtttcagtacgtacgcataccactccatttcgaattacgcgtatcgcaaaatt
gccaatcgccgcaaggaacgcaataagttcaagcagctgggcgaagagcgcaccctggaa
gagttacaggagcagaagaatccgatgatggtccgcgcggtctgggatgaactctccgac
ctgctcaagcagacgattgacaccctcgatcagcgggaacagtttattgttcgcagccgc
tttgctctcggcaaacatcgcaagattcagacctttcagaaactggccgacgaactcggc
atctccaaagaacgagtgcgtcagctcgaacagcgggccgtagccaaactgagagcactc
gcagaaggatcgcgtctcgatgcgattcgcgaactcgtcggcggctga
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