Gimesia benthica: F1728_08080
Help
Entry
F1728_08080 CDS
T06296
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gim
Gimesia benthica
Pathway
gim00020
Citrate cycle (TCA cycle)
gim00640
Propanoate metabolism
gim00660
C5-Branched dibasic acid metabolism
gim00720
Other carbon fixation pathways
gim01100
Metabolic pathways
gim01110
Biosynthesis of secondary metabolites
gim01120
Microbial metabolism in diverse environments
gim01200
Carbon metabolism
Module
gim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
F1728_08080 (sucD)
00640 Propanoate metabolism
F1728_08080 (sucD)
00660 C5-Branched dibasic acid metabolism
F1728_08080 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
F1728_08080 (sucD)
Enzymes [BR:
gim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
F1728_08080 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QGQ22634
UniProt:
A0A6I6A887
LinkDB
All DBs
Position
complement(2157666..2158544)
Genome browser
AA seq
292 aa
AA seq
DB search
MSILVTEKTRVICQGITGKSGLFHSQQCREYGTPMLGGVTPGKGGTEVDGFPVFNTVEEA
VEKTGANTSLIFVPPPFCGEAIMEAADAGIELIIAITEGVPVTDMVRVMEYLKDKPSRLI
GPNCPGVITPGIAKIGIMPGYIHTPGSVGLISKSGTLTYEAAWQLGNIGLGQSTAIGIGG
DPIIGTTFIDLLEMFQNDPATESIMLIGEIGGTAEIEAAEYIKEHVTKPVAGFIAGKTAP
PGKRMGHAGAIISGGSGTADEKIAALEAAGVVVAESPADMGAAVKRAIEKAS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttagttactgaaaagacacgcgtcatttgccaggggatcaccggtaaatcc
gggctgtttcacagccagcagtgccgggaatatggcacaccgatgctggggggcgtgact
cccggcaaagggggaaccgaggttgatggtttcccggtattcaacaccgtggaagaagcg
gtcgagaagaccggtgccaataccagcctgatcttcgtgccacctccattctgtggcgaa
gcgatcatggaagctgctgatgcgggtatcgaactgatcatcgcgatcaccgaaggtgtt
cccgtcaccgatatggtacgggtgatggaatacctcaaagacaagccgagccgtctgatt
ggtcccaactgcccgggtgtgattactcccgggatcgcgaagatcggcattatgcccggt
tacattcatacgcccggttccgttggcctgatcagcaagagtggtacgctgacttacgaa
gcggcctggcagctggggaacattggtctggggcagagcacggcgattggtattggtggt
gacccgattatcgggacgaccttcatcgatcttttggagatgttccagaacgatcctgcg
accgagtcgatcatgctgatcggtgagatcgggggaaccgctgaaatcgaagcagcggaa
tacatcaaagagcatgtgaccaagccggttgccggtttcatcgccggtaaaacagcgcct
cccggaaaacggatggggcacgctggtgcgattatcagcggcggtagcggaacagcggat
gagaagattgccgctctggaagcagccggtgtcgttgtggcggaaagcccggcagacatg
ggtgctgcggtcaagcgggcgattgagaaagcctcttaa
DBGET
integrated database retrieval system
