Gimesia benthica: F1728_12070
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Entry
F1728_12070 CDS
T06296
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gim
Gimesia benthica
Pathway
gim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1728_12070 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gim03019
]
F1728_12070 (groL)
03110 Chaperones and folding catalysts [BR:
gim03110
]
F1728_12070 (groL)
03029 Mitochondrial biogenesis [BR:
gim03029
]
F1728_12070 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gim04147
]
F1728_12070 (groL)
Enzymes [BR:
gim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
F1728_12070 (groL)
Messenger RNA biogenesis [BR:
gim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
F1728_12070 (groL)
Chaperones and folding catalysts [BR:
gim03110
]
Heat shock proteins
HSP60 / Chaperonin
F1728_12070 (groL)
Mitochondrial biogenesis [BR:
gim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
F1728_12070 (groL)
Exosome [BR:
gim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
F1728_12070 (groL)
Exosomal proteins of other body fluids (saliva and urine)
F1728_12070 (groL)
Exosomal proteins of breast cancer cells
F1728_12070 (groL)
Exosomal proteins of colorectal cancer cells
F1728_12070 (groL)
Exosomal proteins of bladder cancer cells
F1728_12070 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QGQ23364
UniProt:
A0A6I6AA59
LinkDB
All DBs
Position
complement(3208616..3210217)
Genome browser
AA seq
533 aa
AA seq
DB search
MAKMIAFDQEAQEAMRRGISKLARAVRVTLGPKGRNVILEKSFGSPTVTKDGVSVAREIE
LSDKFEDMGARMVREVASKTSDIAGDGTTTATIMAEAIYNEGLKSVVAGVSPIAMKRGMD
KAVEDIVDKLHKMSIECKNKKAISQVGKVASNGDEEIGKILADAMEQVGKDGVITVEEGQ
SLHTSFEVVEGMQFDRGYLSPYFVTDPQSMSCELEDCYVLVHEKKISNIKDLVPVLEKVV
NAGKPLLIIAEDIEGEALSTLVINKLRGTFRCSAVKAPGYGDRRKAMLQDIAIMVGGQAI
FEDLGIQLENLQLSDLGVAKKVTVDKDNTTIIEGGGKPGEIKARIDQIRRELENSTSDYD
KEKLEERIAKLSGGVAQINVGAATESEMKEKKARVEDALHAVRAAVAEGILPGGGVALLR
SSSACKPTGLSEEEKVGYEIILRACRAPLTSIANNAGDDGSVVCEKVSEMEGNMGYNAAT
SKYEDLVKTGIIDPTRVTRSALQNSASVSTLLLTSDALIAEKGKDDHGDDDLH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgattgccttcgatcaggaagctcaggaagcgatgcgacgcggcatcagc
aagctggcaagagcggttcgtgtgactctggggccgaaaggtcgtaacgtcattctcgag
aaaagctttggttctccaactgtaaccaaagacggtgtatctgttgcccgcgaaatcgaa
ctgtctgacaagttcgaagacatgggtgcccgcatggtgcgtgaagttgccagcaaaaca
tctgacattgcgggtgacggaaccacaactgcaaccatcatggctgaagcgatctacaac
gaaggcttgaagtctgttgttgccggcgtcagcccgattgccatgaaacgtggcatggat
aaagctgtcgaagacatcgtcgacaaacttcacaagatgtccatcgagtgcaaaaacaaa
aaggccatctctcaggttggtaaagtcgcttctaacggcgatgaagaaatcggcaagatc
ctggctgatgccatggaacaggtcggtaaagatggtgtgatcaccgttgaagaaggccag
agcctgcacaccagcttcgaagtcgtcgaagggatgcagttcgatcgtggttacctctca
ccttacttcgtgaccgatcctcagagcatgtcttgcgaactggaagactgctacgtactg
gtacacgaaaagaagatttccaacatcaaggacctggttcctgttctggaaaaagtggtt
aacgccggcaagccgctgctgatcatcgctgaagacatcgaaggcgaagccctctcgact
ctcgtgatcaacaagctgcgtggtaccttccgctgcagtgcagtcaaagcccccggttac
ggtgaccgtcgtaaagccatgctgcaggatatcgccatcatggttggtggtcaggccatt
ttcgaagacctcggtattcagctggaaaacctgcagttgtctgacctgggcgtcgccaag
aaagtgaccgtcgacaaagacaataccaccattatcgaaggtggcggaaagccaggcgaa
atcaaagcccgtatcgaccagattcgtcgcgaactggaaaactccaccagcgactacgac
aaagaaaaactggaagaacggatcgccaagctgtccggtggtgttgcccagatcaacgtg
ggtgccgctacagaaagcgaaatgaaagaaaagaaagcacgcgtcgaagacgctctgcac
gccgttcgggctgctgttgctgaagggatccttcccggcggtggcgttgctctgctgcga
agctcttctgcctgcaaaccaaccggtctgtctgaagaagaaaaagtgggttacgaaatc
attctgcgtgcctgccgtgcaccactgacttcgatcgccaacaatgccggcgacgatggt
agcgtggtttgcgaaaaggtttcggaaatggaaggcaacatgggctacaatgccgcgact
tccaagtacgaagatctggtcaaaaccgggatcattgacccgacccgcgtgacccggtcc
gctctgcagaattccgccagtgtttcaaccctgctgctgaccagcgatgctctgatcgct
gaaaaaggcaaggatgaccatggcgacgacgacctgcactaa
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