Gimesia benthica: F1728_13545
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Entry
F1728_13545 CDS
T06296
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gim
Gimesia benthica
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gim03032
]
F1728_13545
03400 DNA repair and recombination proteins [BR:
gim03400
]
F1728_13545
Enzymes [BR:
gim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1728_13545
DNA replication proteins [BR:
gim03032
]
Prokaryotic type
DNA Topoisomerases
F1728_13545
DNA repair and recombination proteins [BR:
gim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1728_13545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIP1_clath_bdg
Motif
Other DBs
NCBI-ProteinID:
QGQ23639
UniProt:
A0A6I6AFM0
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Position
3598958..3601372
Genome browser
AA seq
804 aa
AA seq
DB search
MAKRKSASNGAENGTNGNASVETDRIEYVPISEVTRRRYLNYAMSVITSRALPDVRDGLK
PVQRRILYVMYHDLRLVANAKPRKCAKICGDTTGNYHPHGDASVYDALVRLAQDFNLRNP
LVNGQGNFGSIMGLPAAAARYTEARLTGIAEHLMNELRYQTVEMRPNYDGTRNEPVVLPA
RFPNLLVNGVHGIAVGMATNIPPHNLGEVVKACTHLIHHPDATVAQLMKYIKGPDFPLGG
RIVTDKRSLTNVYKDGRGPIKIRGEWKIDTDKKASSKNAQRLIVYSVPYAVETGSLLSEI
GGIVESRKLPQLLDVADETDDKNGLKIVLEIKPDADPETVMAFLYKHTHLEQNFAVNLTC
LVPDDSDVLIPHRCDLREMLQYFLDFRFITVRRRFEYQLEQLERRIHILEGFEIIFNGLD
KALKLIRASNGKQDAAQKLMAEFPLDEIQTMAILELQLYRISKLEINTIREELEEKRAEA
DRIRKILASDKRLWKVVETELKELGEEFPEKRQTKLGSSDEITEFDPQAYIVKENTNVVV
TREGWIKRVGRLQTKGDTRELAKTRVREGDSVLDVAPGSTLDHVVFFSSDGVAYTLPIEQ
VPVSSGYGEPLSKHARMGDGASLVAAITTDARFTPEDKATKKEPIPTPHLLIVTEKGQIM
RISFSLFRQASTKAGRKFCRLGKDDRVVYAGLVDEAETMFIATKDARVLHCEIEEAALLS
NPGKGVKGIKLEKGDSVMGALQLTRPSDCLRVINTSGKKMTFGQMKYGVTSRGGKGVKTS
QRSGFAEILYPPIEVVDWDEIEQE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaacgaaaatcagccagtaacggcgcagagaatggcaccaacggaaacgccagc
gttgaaacggaccgtattgaatatgttcccatcagtgaggtcacgcgacgtcgctatctg
aactacgcgatgtcagtcatcacttcccgggcgttgcctgatgtccgggacggtctgaag
ccggtacaacgccgcattttgtatgtcatgtaccacgacttgcgtctggtggccaatgcg
aagccccgtaagtgtgccaaaatctgtggtgataccacgggtaactaccatcctcacggt
gacgcttccgtgtacgatgccctggtccgtctggcccaggacttcaacctgaggaaccct
ctggtcaatggtcaggggaacttcggttcgattatgggtctgccggccgctgctgcccgt
tatacggaagcccgtctgaccggcatcgcagagcatctgatgaatgagctgcgataccag
accgtcgaaatgcgtcccaactatgatggtacccgcaatgagccggtcgtgctgccggcc
cgcttccctaacctgctggttaacggagtacacgggattgccgtcgggatggcgacgaac
attccacctcacaatctgggtgaagtagtcaaagcctgcacgcacctgatccatcatccc
gatgcgaccgtggcccaattaatgaaatacattaaaggtcccgacttcccgctgggaggc
cggatcgtcacggacaaacgctctctcaccaatgtctataaggatggccgcggaccgatc
aaaatccggggcgagtggaagatcgatacagacaaaaaagccagttcgaaaaatgcccag
cggctgatcgtttattcggtaccttatgccgtcgaaaccggatctctgctgtcggaaatc
gggggtattgtcgaatcgcggaagctgccccagctgctggatgtcgcggacgaaacggac
gacaagaacggtctgaagatcgtcctggagatcaagccggatgccgaccctgaaacggta
atggccttcctgtacaagcacacgcacctggaacagaacttcgccgtcaacctgacctgc
ctggttcccgatgattcagacgtgctgatcccccaccgttgcgatctgcgggagatgtta
cagtacttcctggacttccgtttcattacggtccgccgccgcttcgaatatcagctggaa
cagctggaacgccggatccatatcctggaaggtttcgaaatcatcttcaacgggctggat
aaagccctgaaactgattcgtgccagtaacgggaaacaggatgccgctcagaagctgatg
gccgaatttccgctggatgaaatccagaccatggccattctggaactgcagctgtaccgc
atctcgaaactggaaatcaatacgattcgcgaggagctggaagagaaacgggccgaagcg
gaccggattcgcaagatcctggcttccgacaaacgactctggaaggtcgttgaaaccgaa
ctgaaggaactgggcgaggaattccccgagaaacgccagacgaagctgggttcttcggac
gaaattaccgagttcgatccgcaggcgtatatcgtcaaagaaaacacgaacgtggtggtc
acccgcgagggatggatcaaacgtgtcggacggctgcagaccaaaggcgatacccgagaa
ctcgccaaaacgcgtgtccgcgagggagacagcgtgctggatgtcgcaccgggaagcacc
ctggatcatgtggtgttcttctccagcgatggcgtcgcctatacgctgccgatcgagcag
gttccggtctcctcgggttacggtgagccgctttcgaaacatgcccgcatgggtgacggg
gcgagcctggtcgctgcgattacgacagacgcccggttcacaccagaagataaagcgacg
aagaaagagccgattcctacgccgcacctgctgatcgtcaccgaaaaggggcagatcatg
cggatttcgttcagcctgttccgccaggcatcgacgaaagcgggccgtaaattctgtcgg
ctcggaaaagacgaccgggtggtctatgccggcctggtggatgaggcggaaacgatgttt
atcgcaaccaaagatgcccgtgtgttacactgtgagatcgaagaagcagccctgctctcg
aatcccggtaaaggggttaaagggatcaagctggaaaaaggggactccgtcatgggtgcc
ctgcagctcacacgacccagcgactgtctgcgggtcatcaataccagtggcaagaaaatg
acgttcgggcagatgaagtacggcgtcacgtctcgcggtggtaaaggggtcaaaaccagc
cagcggagcggattcgccgagatcctctatccgcccattgaagtggtggactgggacgag
atcgaacaggaataa
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