Gimesia benthica: F1728_20010
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Entry
F1728_20010 CDS
T06296
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
gim
Gimesia benthica
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gim03000
]
F1728_20010
Transcription factors [BR:
gim03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
F1728_20010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_11
HTH_22
HTH_Tnp_1_2
TetR_C_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QGQ24831
UniProt:
A0A6I6AIB7
LinkDB
All DBs
Position
complement(5166908..5167528)
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AA seq
206 aa
AA seq
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MTSKSANKGRLTDRKRAAIMEAAVSELKQNGFDNTSMDRIAEVASVSKRTVYNHFPSKED
LFAAIVDELMSRCQLIEVSDYTPGEPIATQLSDIGQTAVDLMASPEFQDLARVTLSRFLQ
SPDLAREMMIDSTQFEAGLIVWLETAHQEGNLQIPDAQLAAKQFLGLIQSFAFWPPLIGK
EAPLTEVQKKQLVESTVSMFLAQYSC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaaatcggcaaacaagggaagactgacagaccggaaacgggccgcaattatg
gaggccgccgtttcggagttgaagcagaacggtttcgacaacaccagtatggaccggatt
gcggaagtcgcatctgtttccaagagaacggtttacaatcattttcccagtaaagaagat
ctgtttgctgcgattgtggatgaactgatgtcgcgctgtcagctgatcgaagtctctgac
tatactcccggtgaacccattgccacgcagttgagcgacattggtcagacggccgtcgat
ctgatggcttcccccgaatttcaggacctggcccgggttacgctttcgcgatttttgcag
tcgccggacctggctcgtgagatgatgattgattcgacccagtttgaggccgggttgatc
gtctggctggaaacagcgcatcaggagggtaacctgcagattcctgatgcccaactggcg
gcgaagcagttcctgggactgattcaatccttcgccttctggcccccgctgatcggcaag
gaagcgccactgacggaagtacagaagaaacagcttgtcgagtcgacggtcagcatgttt
ctggctcagtattcctgctga
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