Gimesia benthica: F1728_21680
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Entry
F1728_21680 CDS
T06296
Name
(GenBank) DUF116 domain-containing protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gim
Gimesia benthica
Pathway
gim00900
Terpenoid backbone biosynthesis
gim01100
Metabolic pathways
gim01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
F1728_21680
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gim01006
]
F1728_21680
Enzymes [BR:
gim01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
F1728_21680
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
F1728_21680
2.5.1.29 geranylgeranyl diphosphate synthase
F1728_21680
Prenyltransferases [BR:
gim01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
F1728_21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF116
GalP_UDP_tr_C
Motif
Other DBs
NCBI-ProteinID:
QGQ25138
UniProt:
A0A6I6AFU8
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All DBs
Position
5584842..5586689
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AA seq
615 aa
AA seq
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MSIAPLDQESSEDKRVPAHDQAEGRASEDPKPVKRKRRSTSHLKAVPETLALREEMKAEA
EKFVQRLDCSNPFTKAMLEDWSRELLAEMEQPEKFLGFMMVLIGNFFWKRQFLAIPFERR
LLLLPHCLKHAEGCPAEYDEFGLDCEKCGACSIADYKVKAEKLGYKVLVAEGSPVVLKII
VGGYVDGILGVACLNVLEKSIDKVLIAGVPSYAVPLHSGDCKNTKMDEPWIWEVLEKYEP
LEQPLTRSYLPTMRAANSLFEEHFDEILPPLRTKTEAAARTPLGKTEAIAYEWLKHGGKR
FRPFITLAAYDALIKAQQDEAADNSQTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRY
GQETLHRQHGTGMAINIGDYLIGIGYRLLNEARADIGAEAAADLVEKMAAAHLKLCEGQG
AEMAWQESETFELSPLDALQIYALKTSPAFEAALYAGVRMTGSVNEYEELISSFSRQIGV
GFQILNDLKDWRGDDNNKLISGQDALAMRPTLLLALALQAGDEQQKAELKEILNGGGPSD
YARINRLRKIYEACDVFTKAEVLVDKSRDRAEELAESVQNEDLKQLLKFFCETVLAEETP
EVKPDLPVLMPQPIA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgtccattgcgcctttagaccaggaaagttccgaagacaaacgcgtccccgctcacgat
caagctgagggccgtgcttccgaagatcccaaaccggtcaaaagaaaacgccgcagtacc
agccatctcaaggcggtgccggaaacccttgcgctgcgcgaagagatgaaagcagaagcc
gagaagttcgtgcaacgtctcgactgctccaatcccttcaccaaggcgatgctggaagac
tggtcgcgcgaactgctggcggaaatggaacagcccgaaaaattcctcggcttcatgatg
gtgctgatcggcaacttcttctggaaacgccagttcctcgcgattcccttcgaacgccgt
ctgctcctcctgccgcactgcctgaaacatgccgaaggctgtcccgcggaatacgatgag
ttcggtttggactgcgaaaaatgcggcgcctgctccatcgctgactacaaagtcaaagcc
gaaaagctgggctacaaggtgctcgtcgccgaaggttcgcccgtggtcctcaagatcatc
gtcggcggttacgtggacggcatcctcggggtcgcctgtctcaacgtgctggaaaagtcg
atcgacaaagtcctcatcgccggcgtaccttcctacgccgtccccctgcattccggtgac
tgtaaaaacaccaagatggacgagccctggatctgggaagtcctcgagaaatatgaacca
ctcgaacagccgctgacccgcagctatctgcccaccatgcgggccgccaactcgctgttc
gaagaacactttgacgaaattctgcctccgcttcgcacaaaaaccgaagccgccgcccgc
acaccgctgggcaagaccgaagccatcgcttacgaatggctcaagcatggcggcaaacgc
ttccgtcccttcatcaccctggcggcctacgatgctctgatcaaggcacaacaggacgag
gcagcagacaacagtcagacttatccgctgggcgtgcagaaagctgcgatggcgattgag
gtcttccacaaagcgtcactgattcacgacgacatcgaagacgatgaccagtaccgttac
ggtcaggaaaccctgcaccgtcagcacggcaccggcatggccatcaacatcggcgactac
ctgatcggcatcggttaccggctgctcaacgaagcccgggccgacatcggtgctgaagct
gccgcggacctggtcgaaaaaatggccgccgcacatctcaagctctgtgaagggcagggg
gcggaaatggcctggcaggaaagcgagaccttcgaactctccccgctggatgccttgcag
atctacgcactcaaaacgtcccccgcattcgaagccgccctctatgccggcgtgcggatg
acaggctccgtcaacgagtatgaagaactgatctcttccttctcgcgccagatcggcgtc
ggcttccagattctgaacgacctcaaagactggcgcggcgatgacaataacaagctcatc
tccggtcaggatgccctggcgatgcggcctaccctgttactcgccctggccctgcaggcc
ggcgacgaacagcagaaagccgaactcaaggaaattctcaacggcggcggtccttcggac
tacgcacgcatcaaccgcttgcggaaaatctatgaagcctgtgatgtcttcacgaaagcc
gaagtcctggttgacaagtcacgagaccgggccgaagaactggccgagagcgtccagaac
gaagacctgaaacagctgttgaaattcttctgcgaaaccgtactggccgaagaaaccccc
gaggtcaaacccgatctcccagttctgatgccacaaccaatcgcctag
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