Gimesia benthica: F1728_26050
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Entry
F1728_26050 CDS
T06296
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gim
Gimesia benthica
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gim03032
]
F1728_26050
03036 Chromosome and associated proteins [BR:
gim03036
]
F1728_26050
03400 DNA repair and recombination proteins [BR:
gim03400
]
F1728_26050
DNA replication proteins [BR:
gim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F1728_26050
Chromosome and associated proteins [BR:
gim03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
F1728_26050
DNA repair and recombination proteins [BR:
gim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F1728_26050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4011
RNA_pol_Rpc34
ATG16
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QGQ25919
UniProt:
A0A6I6ANA3
LinkDB
All DBs
Position
complement(6689671..6690141)
Genome browser
AA seq
156 aa
AA seq
DB search
MTKKEIVKVISEEIGLTQLKTKEIVQKTFDAIVDTLVTDKRIELRNFGVFEVKKRAARKA
RNPRTGERVDVEEKYVVTFKPGKEMEKRVRDLEEEAAKLKAAAASQPPVSSPPAASTPPQ
QTPPPSSAPPSPGTTPGSPQVGSYNNSYPSGTQHTP
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaaaaagagattgtcaaagtgatttcggaagagattggtctgacacaactcaag
acaaaagagattgtgcaaaaaacgttcgatgcgattgtcgatacactcgtcaccgacaaa
cgaatcgagctccgcaattttggcgttttcgaagtcaaaaagcgggcggcccgtaaagcc
agaaatccaagaacaggcgaacgcgtcgacgtggaggagaagtacgtcgtcacattcaag
cctggtaaggaaatggaaaaacgtgtacgcgacctggaagaagaagcagccaagctcaaa
gcggccgctgcctcccaaccaccggtaagcagtccacctgcggcgtcaacaccaccgcag
cagactcctccaccgtcgtcggcaccacccagtcccggtacgacaccagggtcccctcaa
gtaggaagctacaacaattcctacccgtcgggtacgcagcatacaccttaa
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integrated database retrieval system
