KEGG   Gimesia benthica: F1728_26260
Entry
F1728_26260       CDS       T06296                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gim  Gimesia benthica
Pathway
gim03030  DNA replication
gim03410  Base excision repair
gim03420  Nucleotide excision repair
gim03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F1728_26260 (polA)
   03410 Base excision repair
    F1728_26260 (polA)
   03420 Nucleotide excision repair
    F1728_26260 (polA)
   03440 Homologous recombination
    F1728_26260 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gim03032]
    F1728_26260 (polA)
   03400 DNA repair and recombination proteins [BR:gim03400]
    F1728_26260 (polA)
Enzymes [BR:gim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F1728_26260 (polA)
DNA replication proteins [BR:gim03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     F1728_26260 (polA)
DNA repair and recombination proteins [BR:gim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     F1728_26260 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F1728_26260 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 TraI_hel_assoc_N HHH_2
Other DBs
NCBI-ProteinID: QGQ25961
UniProt: A0A6I6ALJ1
LinkDB
Position
complement(6741971..6744667)
AA seq 898 aa
MKETLYIIDTFSLVFQVFHAVPAMTSPAGQPTNAIFGITRDILNIIKSQAPDYLIFAMDS
SGPGTRNNVYPEYKANRTEMPEDLRPQIPHIMDVVRGFQVPIIECPGWEADDVFATIARQ
AREKGIDTVIVTNDKDARQLINEAVRLYNIRKNKFMDAQAVEDDWGVRPDQVIDFQSLVG
DSVDNIPGVPLIGPKKAQTLIEQFGSLEEVLANADKAKGPKLQQNLKEFAEQARMSRELV
TLNQNLDLSVDWEASRLTHPDRERLRELFMDFGFRRFAEEMKEDFTKPEEVEPQERIRET
VDTEAAFEKFVALLKEQDEFCVDLETTGLKPAEAEIVGWAISWEKHSGYYIPVEGPPGQP
ALDPQLVLSQLKPLLEDPEILITNQNIKYDMVVLMRAGVFLQGVSIDPMVASYLLNAGER
GHSLDKLSERYLQHTMIPISELIGSGKQQKKMFEVEIDKVAEYAVEDAEIAWQLSRILKD
ELQQHNLWDLYWDLERPLIPILAEMEFTGIRVDIDELKQQSQALDERLITLIEEIHSLAG
HEFNIASPLQLRTVLFEELNLPVVKKTKTGPSTDQSVLEKLAPLHELPAKITEHRHLSKL
KSTYLDALPGLVNPETGRIHASFNQVVAATGRLSSSDPNLQNIPIRTPEGRLIRKAFIPQ
DETWRLLCADYSQIELRVLAHLSQDDALSQAFREGADIHTAVAADIFRVSPDDVDSDMRR
TAKAVNFGVIYGQSPFGLSEAIGIPQNEAAGFIDDYFDRYQGVREFLDQILEDCASKNYV
TTICGRKREIQGVRGGVQKQLNMPERTAINTVIQGSAADLIKQAMINVSQRLKDEAHPGR
MLMQIHDELVFEVPVGELESLGEIVQCEMESAMDLEVPLIVDMSSGLNWLEQTSLGSD
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgaaagaaacactttacatcattgatacgttttctctggtatttcaggtttttcatgct
gtgccggccatgaccagtcctgcgggtcaaccgaccaatgccatctttggcattacgcgg
gacattctgaacatcatcaagagccaggcccccgactacctgatcttcgccatggattcc
agcggaccgggcacccggaataatgtgtatcccgaatataaagcgaatcgcaccgagatg
ccggaagacctccgtccccagattccgcacatcatggacgtcgtacggggatttcaggtt
ccgattatcgaatgtccgggttgggaagctgatgacgtttttgccaccattgcccgccag
gcccgggaaaaaggcatcgataccgtgatcgtcaccaacgataaggatgcccgccagctg
attaacgaagccgtacggctctacaacattcgcaaaaacaagttcatggacgcccaggcc
gtcgaagacgactggggcgtgcgaccggatcaggtcatcgatttccagtcactcgtggga
gacagcgtcgacaatatccccggcgtccctctcatcggtcccaagaaggcacaaaccctg
atcgagcagttcggttccctggaagaggtactcgccaatgcagataaagccaaaggcccc
aaactgcagcagaacctgaaagaattcgccgaacaggcccgcatgtcccgcgagctggta
acgctgaatcagaacctggacctcagcgttgactgggaagcctcccgtctgacccatccc
gaccgggaacgactgcgcgagctgttcatggatttcggcttccgtcgcttcgccgaggag
atgaaagaagacttcaccaaaccagaggaagtcgagccccaggaacgcatccgggaaact
gttgataccgaagccgccttcgagaaattcgtggcactgctcaaggaacaggacgaattc
tgcgtcgacctggaaaccaccggactgaaacccgccgaagcggaaatcgtcggctgggcc
atcagctgggaaaagcacagcggctattacattcccgtcgaaggtcctccggggcagccg
gcccttgatcctcaactggtactcagccagctcaaaccactgctggaagaccccgagatc
ctgattacgaatcagaacatcaagtacgatatggtcgtgctgatgcgggccggcgtcttt
ctgcagggcgtcagtatcgatccgatggtcgcttcctatctgctcaatgccggcgaacgg
ggacacagtctggacaagctgtccgaacgctatctgcagcacaccatgattcccatttcg
gaactgatcggctctggaaaacagcagaaaaagatgttcgaagtcgaaatcgacaaggtc
gctgaatacgcggtcgaagatgccgagatcgcctggcaactctcccggattctcaaggat
gaactgcagcaacataacctgtgggacctgtactgggacctggaacgtccgctgattccg
attctcgccgagatggaattcaccggcatccgcgtcgacatcgatgaactcaagcagcag
agccaggcgctggatgaacgactgataacgctcatcgaagagatccactcactggccggc
catgaattcaacattgcctctcccctgcagctccgaacggtgctgttcgaagagctgaat
ctgcccgtcgtcaagaaaaccaaaaccggccccagtaccgatcagagtgtattggagaag
ctggccccgttacacgagttgcctgcgaaaatcaccgaacaccggcacctctccaagttg
aagagtacctacctcgatgccctgcccgggctggtcaatccggaaaccggacgcattcac
gccagcttcaaccaggtggtcgctgccaccgggcgtctgagttccagtgacccgaatctg
cagaacatcccgatccgcacaccggaagggcgtctgatccgcaaagccttcattccgcag
gatgaaacctggagactgctttgtgcggactattcgcaaatcgaactccgtgtgctggcc
catctcagtcaggacgatgctctcagccaggctttccgggaaggagccgacattcatacc
gcggtcgccgccgatatcttccgcgtctctccggatgacgtcgacagtgacatgcggcgg
accgccaaagcggtgaacttcggtgtgatttatggtcagagtcccttcggtctctccgaa
gcgattggcatccctcagaacgaagccgccggttttatcgatgattactttgatcgttac
cagggtgtccgggaattcctggatcagatcctggaggattgtgcgagcaagaattacgtc
acgaccatctgtggcagaaaacgtgagattcagggcgtgcgaggcggcgttcagaaacag
ttgaatatgcccgaacggaccgccatcaataccgtcattcagggatcagccgccgacctg
atcaagcaggcgatgatcaacgtcagccagcgtctcaaagacgaagcacaccccggccgg
atgctgatgcagattcatgacgaactggtcttcgaagttccggtgggcgaactggaatcg
ctgggagaaattgtacagtgcgagatggaatctgccatggatctggaggtgcctctgatc
gtcgatatgtcgtccgggctgaactggctggagcagacgtctctgggaagtgactga

DBGET integrated database retrieval system