Gimesia benthica: F1728_28980
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Entry
F1728_28980 CDS
T06296
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gim
Gimesia benthica
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gim03016
]
F1728_28980 (truB)
Enzymes [BR:
gim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F1728_28980 (truB)
Transfer RNA biogenesis [BR:
gim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1728_28980 (truB)
Prokaryotic type
F1728_28980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QGQ26466
UniProt:
A0A6I6AJZ7
LinkDB
All DBs
Position
complement(7438574..7439503)
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AA seq
309 aa
AA seq
DB search
MSGSPSKADLQLSGLLSVNKPQDITSRQVVNQFQKLVRPARVGHAGTLDPLATGVLVLCV
GPSTRLIRFVQDQPKEYIGEFVLGKRSDTDDITGEVVETPDCPVIEWEQLERLLPTYRGS
IEQTPPKFSAVHVNGRRAYDLARQGKTVEIEPRTVEVYELEIVKFEFPRFQLRIVCGSGT
YIRSIGRDLGEDLGVGATMTSLVRSRIGEFKLESALSLEEPPTLEAITAHLQPPIKAVPH
LPHYRCDARELRAISLGQKLTGPPERLPETDEITEVAIVSPAGELAAIAEWDRPHQCLSP
RQVYAQRPN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttctccttctaaagcagacctgcaactctcaggattgttgagcgttaacaaa
ccccaggacatcacttcccgccaggtcgtcaaccagtttcaaaagctggtccgcccggcc
agagtcggtcatgcagggacactcgatcccctggcaacgggagtgctggtactgtgcgtc
ggcccctcgacacggttgatccgctttgtgcaggatcagcccaaggaatacatcggcgaa
ttcgttctgggcaaacggagcgacactgatgatattacgggcgaagtcgtggagacgccg
gactgtccggtgatcgaatgggaacagttggaacgcttgctacccacctatcgtggttcc
atcgaacagactccgccgaagttttcagcagtgcacgttaatggcagacgggcatacgat
ctggcccgccagggtaagaccgttgaaatcgagcctcgcacggtcgaagtctatgaactg
gaaatcgtgaaatttgagttcccccgttttcagctgcggattgtctgcggttcgggaact
tacattcgttcgatcggacgcgacctgggagaagaccttggtgtgggcgccacgatgacc
tcactggtacgttcgcggattggggaattcaaactggaatcagcattgagcctcgaagaa
ccgccgactctggaagcgatcactgcccatctgcaaccgccaatcaaagccgtcccccat
ctaccgcattaccggtgcgatgcacgagaactgagagccatcagcctgggacagaaactg
accggccctccggaaaggctgcctgagacggacgaaatcactgaagtcgcgatcgtcagc
cccgccggtgagttggcagcgattgcggaatgggatcgtcctcatcagtgtctctcccct
cgacaggtatatgcgcagcgtcctaactaa
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