Gimesia benthica: F1728_30630
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Entry
F1728_30630 CDS
T06296
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
gim
Gimesia benthica
Pathway
gim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1728_30630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gim03400
]
F1728_30630
DNA repair and recombination proteins [BR:
gim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1728_30630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1728_30630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
AAA_21
nSTAND1
AAA_23
AAA_16
AAA_29
Viral_helicase1
RsgA_GTPase
AAA_22
DnaJ_CXXCXGXG
AAA_25
NACHT
RNA_helicase
PRK
Anti-TRAP
DUF3292
Motif
Other DBs
NCBI-ProteinID:
QGQ26766
UniProt:
A0A6I6AKR9
LinkDB
All DBs
Position
7921111..7923639
Genome browser
AA seq
842 aa
AA seq
DB search
MPSQSMQAIQIHGARCHNLKNIDVTFPHQQLTVVTGVSGSGKSSLVFDTVHSEGQRRFLE
NLSPATRQLLSQMTPPDVDLITGLPPTISIEQTPRTQSKRSTLATLTEVYDFFRILYAQV
GIVHCTRCGQPLHQQSAEQIVDLILALEDRQKVMILAPVVSGKKGQHSALLEKIVKEGFV
RARIDGEILDVTQAPSLNEQTDHDIEIVIDRIIVKEGIEARLKESVDLALKHGNGACYVT
HQTPEGWSDRYLSTRLACGACNLSFPDPEPRTFSFNSPYGACPVCDGLGVIEADDDEQTV
SVCPDCQGGRLNIYPRSIFLHQTSIDQLMRMTPSGITAWLREWESQELEQSGARNREIAS
QLVPPIRSRLQYLEEIGLNYLQMARPVRTLSGGELQRARLAACLGSETTGACYILDEPTA
GLHAKETEKLLTILNRLKQNGNTVIVVEHDLDLIKAGDLILDLGPGAGQAGGEVVAAGSY
EEVVQNEESFTARALRHAAHFPDALTSPPSDAKISLTGARLHNLKNVTLELPLGQLVCVT
GVSGCGKSTLIMETLVPALKAELRKQQVQNKEYDSLDGVAHLQQVKTIDQTPIGRSGRSN
PATFCGIWDEVRKLYARTKTARLRGYTASRFSFNSKQGRCTACQGQGYRRVDLQFLPSLY
LPCELCGTRRFNRQTLAVKYRDKSVSDLLDMSIAEAAQFLEAIPKVSDVLNVLVELGLDY
LALGQPANMLSGGEAQRLKLAKELITRTPGQTLFVLDEPTRGLHVHDIDQLMQVLRRLVG
AGHSVLFIEHQAQAIIQADWMIELGPTGGEAGGYLLDAGSPRDVAQRKAGATGEMLSELL
LR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccagtcgatgcaagccattcagattcatggggctcgctgccataatctgaaa
aatatcgacgtcacttttccacatcagcaactgacggtggtgaccggagtcagtggtagt
ggcaaaagcagcctggtgtttgacaccgtgcacagcgaaggtcagcggcgcttcctggaa
aacctctcgccggccacccgtcaattactcagccagatgacacctcctgatgtggacctg
atcacaggactgccccccacgatcagtattgaacagaccccacgtacccagtcgaaacgc
agcacactggcgacgctgaccgaggtctacgatttctttcgcatcctttatgcacaagtg
ggaatcgtacattgcacgcgttgtgggcaaccattgcaccagcagtcggccgaacagatt
gtcgatctgatactggcactggaagatcggcagaaggtcatgattctcgcgccggtggtc
agcggtaagaaggggcagcactctgcgcttctggagaagattgtcaaagaggggtttgtg
cgagcacgcattgacggagagattctggatgtcacacaggctccctctctcaacgagcag
acggaccacgatattgaaattgtgatcgaccggattatcgtcaaagaggggattgaggcc
cgtctcaaggaatcagtcgatctggctctcaagcatggcaatggagcctgttatgtaacc
catcagacaccagagggctggtcggaccgatatctgagcacccgcctggcctgtggggcg
tgtaatctgagtttcccggatcccgaaccccgcaccttcagctttaacagcccctacgga
gcctgtcccgtctgtgatgggctgggggtgattgaagcggacgatgatgagcaaacggtc
tccgtatgccctgactgccagggagggagactgaatatctatccccgatccatttttcta
caccagacctccattgaccagctgatgcgaatgaccccctcaggcatcaccgcctggctg
cgtgagtgggagtctcaggagctcgaacagtccggcgcccgaaatcgggaaattgccagc
cagttggtgccgccgattcggagtcgtttacagtatctggaggaaatcggcctgaattac
ctgcagatggcccggcctgtccgaacgctttcagggggagaactgcaacgggcgcgactg
gcggcctgcctggggagtgagacaaccggcgcctgttatattctcgacgagccgactgcc
ggtttgcatgcaaaagagacggaaaaactcctgaccattctgaatcgccttaagcagaat
ggtaacaccgtgattgtggtagaacacgatctggacctgatcaaagccggtgatctgatt
ctcgacctggggccgggggcagggcaggcgggaggcgaagtcgtcgccgcgggctcttac
gaggaggtggtccagaatgaagaatcgtttaccgcccgggcactccgccacgctgctcac
tttccagacgcgctgacgagtcccccgtcagacgcgaaaatcagcctgaccggggcccgg
ctgcataatctgaaaaacgtcacactcgaacttcccctcggacaactcgtctgtgtcacc
ggcgtcagtggatgtgggaaaagtaccctgatcatggaaaccctggtgccggctctgaag
gcggaattacgaaagcagcaggttcagaacaaagaatacgattccctggatggagtcgca
cacctgcaacaggtgaagaccattgatcagactcccattggtcgcagcggtcgctctaat
ccggcgacgttctgtggaatctgggatgaagtccgcaaattatacgcgcgcactaagaca
gcgcgattgcggggatacacggcgagccgtttcagtttcaattcaaaacagggacgctgc
acggcctgtcagggacaagggtaccggcgtgttgatctgcagttcctgccttccctgtat
ctgccctgtgagttgtgtggcacgcggcgttttaaccgacagacactggccgtcaagtat
cgtgacaaaagtgtgagcgatctgctcgacatgtccatagcagaggcggcacagtttctg
gaggcgattcccaaggtcagcgatgtgcttaatgtcctggttgaattgggactggattat
ctggcactggggcagccggccaacatgctatccggcggtgaagctcagcgattgaaactg
gcgaaagaactcatcacccgcacgccaggacaaacgctgtttgtactcgatgaaccgaca
cgcgggctgcacgtgcatgacatcgatcaattaatgcaggtattacgacgactggttgga
gcaggtcattcggtcctgtttatcgaacatcaggcacaggcaatcatccaggctgactgg
atgattgaactgggaccgacgggaggcgaagccggtggttacctgctcgatgccggctcc
ccccgggatgtggcccagcgaaaagcaggggcgaccggtgaaatgctgtctgaacttctg
ttgcgataa
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