Gimesia benthica: F1728_30875
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Entry
F1728_30875 CDS
T06296
Symbol
nirD
Name
(GenBank) nitrite reductase small subunit NirD
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
K00363
nitrite reductase (NADH) small subunit [EC:
1.7.1.15
]
Organism
gim
Gimesia benthica
Pathway
gim00910
Nitrogen metabolism
gim01100
Metabolic pathways
gim01120
Microbial metabolism in diverse environments
gim01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
F1728_30875 (nirD)
Enzymes [BR:
gim01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
F1728_30875 (nirD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Rieske_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rieske
NIR_SIR_ferr
Rubredoxin_C
HI0933_like
Pyr_redox_3
AlaDh_PNT_C
NAD_binding_7
GIDA
Rieske_4
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QGQ26809
UniProt:
A0A6I6AR47
LinkDB
All DBs
Position
7986986..7989949
Genome browser
AA seq
987 aa
AA seq
DB search
MIQQNFDNKKNVVVIGNGMVGLRFCEQLVEKDEQQEYKITTFCEEPRAAYDRVGLTQFFA
HNDAEKLMLARREWYADNQIDLHLSDRAVSIDRENKIIRSQKGVEIPYDKVVIATGSYPF
VPDVPGIKNRGVFVYRTINDLEQIIAYAKKSKTAAVIGGGLLGLEAAKAALDLGLQTHVL
EFAPRLMPRQIDDAGSKVLVQKIEELGVQVHLNKATDKVLGESRVEGILFQDGDTLDLDM
IIVSAGIRPRDELARQCDLEVGPRGGILVNDFLQTSDPDIYAVGEVALHSGMVYGLVAPG
YQMAEVAATHLCHAEAEFTGSDLSTKLKLMGVDVASFGDYEAGPDVSKSLTFEDPFKGVY
KKLVFNTEGTHLLGGILIGDASDYGSLSLLAKSEDKLPCSPHELVVGSGGGIPGSSAADM
PDDAQICSCNNVTKGQICAAIQDQELTSVDEVKACTKAGGGCGGCMPLVTDVFKAEMAAA
GITVNNHLCEHFEFSRTELFNIIKIKKLKTFSEVIADCGAGNGCEVCKPTVASIIASLWN
EHIVDHAPLQDTNDRFLANMQRGGLYSVVPRVPGGEITPEKLIVLGEVARDFGLYTKITG
GQRVDLFGAEVHDLPRIWEKLIDAGFESGHAYGKALRTVKSCVGTTWCRYGVGDSVGFAI
RLEERYRGIRAPHKIKGGVSGCVRECAEAQSKDFGLIATENGYNLYICGNGGAKPRHADL
FASDLDEETCIKYLDRFLMYYIQTADKLTRTATWLDKLEGGIDHVREVVIEDKLGICDEL
EAMMQSLVDSYHCEWKAVVDNPAKRRLFEQFVNTDEHEPSIELIPQRGQMRPVDWAPDFV
PLESLQAAEPPVPVSDEPPRKWIKVGQASDFPAESGSTVKHGQSQLAVFNFESRGEWFAC
QQMCPHKQAMVLSRGIMGDSHGIPKVACPLHKKTFSLENGSCLSGDEEYAVKVFNVKVDE
EENVYLELPAPEVLDELINQTVCAGAH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagcagaacttcgacaataagaagaatgtcgtcgtcatcggcaacggaatggtc
ggcttgcgattttgtgagcagctcgtagagaaggacgaacaacaggaatataaaatcacc
acgttctgtgaagagccccgggccgcttatgaccgcgttggcctgacgcagttttttgcc
cacaatgacgcggaaaagctgatgctggcccgcagagaatggtatgcggacaaccagatc
gacctgcatctctccgatcgggctgtgagtatcgatcgtgaaaacaagatcatccgctcc
cagaaaggggtggaaatcccttatgacaaagtcgtgatcgccaccggctcttaccccttt
gtgccggatgtgccagggatcaaaaaccggggcgtgttcgtctatcgcacgatcaacgac
ctcgaacagatcatcgcttacgcgaaaaagtccaagacggccgcagtcatcggtggcggt
ctgctcggactcgaagcagccaaggcagctctcgacctcggactccagacacacgtgctg
gagtttgccccccggctcatgccccgccagatcgatgatgcgggttcgaaagtcctcgta
cagaaaatcgaggaactgggcgtccaggttcatctgaataaagccaccgataaggttctg
ggggaatcccgcgttgagggaattctcttccaggatggcgatactttagatctggatatg
atcatcgtctctgccggcatccgtccccgtgatgagctggcccggcaatgtgatctcgaa
gtcggaccgcgtggcgggatactggtgaatgatttcctgcagacctctgatcctgacatc
tatgcggttggcgaggtggccctgcattccggtatggtctacggcctggtcgctcccggc
tatcagatggctgaagtggcagcgactcatctgtgtcacgccgaagcggaatttacgggc
agcgatctttcaaccaagctcaaactgatgggcgtcgatgttgccagcttcggtgattac
gaagcgggacccgacgtttccaagagcctgaccttcgaagacccattcaagggagtctac
aaaaaactggtgtttaacaccgagggcactcacctgctgggaggcattctgattggagat
gcttccgattacggtagcctgtccctgctggccaagtcggaagacaagctcccctgcagt
ccacacgaactggtcgtgggcagcggaggtgggattcccggcagcagcgctgcggacatg
cctgacgatgcacaaatctgctcgtgcaacaatgtcacgaagggacagatctgcgcggcg
attcaagatcaggagctgacatcggtcgacgaggtcaaagcctgcacaaaagcgggcggt
ggctgcggtggttgtatgccactggtaaccgacgtgttcaaagccgagatggcagcagca
ggaatcacggttaacaaccacctctgcgagcacttcgagttctcacggaccgagttgttc
aatatcatcaaaatcaaaaagctgaagacgttttctgaagtgatcgcggattgtggggcc
ggcaatggttgcgaggtctgtaagccaaccgtagcttcgattatagccagtctgtggaac
gagcatatcgtcgatcatgcaccgctgcaggataccaatgacaggttccttgcaaatatg
cagcggggtggtctgtattccgtcgttccccgtgttcccggtggtgaaatcacgcctgaa
aaactgatcgtactcggtgaagtcgcccgagattttggactttatacgaaaatcaccgga
ggtcagcgagtcgacctgttcggagccgaagtgcatgatctgccccggatctgggaaaag
ctgattgatgccggtttcgaaagcggacacgcttatggcaaagccctgagaacggtaaaa
agttgtgtaggtaccacctggtgccgttacggagtaggagattcggtcggttttgcaatt
cgcctcgaagagcgctaccgcggaatccgtgcacctcataaaatcaaagggggcgtttcg
ggctgtgtccgggaatgtgcggaagcgcagagtaaagacttcggactgatcgcgactgag
aatggatacaacctctacatttgtggaaatggcggagccaagccacgacacgccgacctg
tttgcatcggacctggacgaagaaacctgtatcaaataccttgaccgcttcctgatgtat
tacattcagaccgcagacaaactgacacgcaccgccacctggctggataagctggaaggg
ggaatcgaccatgtgcgtgaagtggtcattgaagacaagctgggaatctgcgacgaactc
gaagccatgatgcagtctctggtcgacagttatcactgtgaatggaaagcggtcgttgat
aatcctgccaagcgacgtctgtttgaacagttcgtgaataccgacgaacacgaaccatca
atcgagctcattccacaacgcggccagatgcgacctgtcgactgggcaccggactttgtt
ccgctcgagagcctgcaggccgctgaaccaccggtccccgtttcggatgaaccaccacgc
aaatggatcaaggtggggcaggccagcgattttccagcggaatcgggatcgaccgtcaaa
catggtcaatctcagctggctgttttcaacttcgaaagtcgcggggaatggtttgcctgt
cagcagatgtgcccgcataagcaggcgatggttctctcccggggtatcatgggagattca
cacgggatccccaaagttgcctgcccgctgcataagaagactttttccctggagaatggt
tcctgcctgagcggggatgaagaatatgcagtcaaggtgttcaatgttaaagttgatgaa
gaggaaaacgtttatctcgagctgcctgctcccgaggtactcgatgaattaattaaccaa
acagtatgtgctggcgctcactga
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