KEGG   Gordonia iterans: C6V83_01525
Entry
C6V83_01525       CDS       T05370                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
git  Gordonia iterans
Brite
KEGG Orthology (KO) [BR:git00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:git03032]
    C6V83_01525 (gyrB)
   03400 DNA repair and recombination proteins [BR:git03400]
    C6V83_01525 (gyrB)
Enzymes [BR:git01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     C6V83_01525 (gyrB)
DNA replication proteins [BR:git03032]
 Prokaryotic type
  DNA Topoisomerases
   C6V83_01525 (gyrB)
DNA repair and recombination proteins [BR:git03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C6V83_01525 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AVL99170
UniProt: A0A2S0KC01
LinkDB
Position
337301..339349
AA seq 682 aa
MADTSSSESKKPKKSTSGEYGADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN
SVDEAMAGHATRVDVTILADGGVQVVDDGRGMPVGMHASGVPAVEVIMTQLHAGGKFDSD
SYAVSGGLHGVGISVVNALSTKVELEIQRDGHVWTQAYDYAKPNTLTTIGDSTTTGTTVR
FWPDGKIFETTTFNAETIARRLQEMAFLNKGLTITLTDERLTENEAEAEVEGEGGDASLK
SEEEKASELAKVRSRVYHYPEGLVDFVRHLNRTKHPIHNTVIDFAAKGEGHEVEIAMQWN
NGYSESVHTFANTINTHEGGTHEEGFRAALTSTVNKYALDKKLIKEKDGKLTGDDIREGL
AAVISVKVADPQFEGQTKTKLGNTEVKGFVQRTCNEHLGHWFEANPAEAKIIVRKAADSA
QARMAARRARELVRRKTATDIGGLPGKLADCRSNDPAKCEVYIVEGDSAGGSAKSGRDSM
YQAILPIRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDLAKLRYHKIVLMADAD
VDGQHIATLLLTLLFRFMRPLIEHGHVYLAQPPLYKLKWQKGAEPEYAYSDRERDAMLEA
GLAAGKKINKDDGIQRYKGLGEMNASELWETTMNPETRILKKVTLDDAAAADELFSILMG
EDVAARRGFIARNAKDVRFLDV
NT seq 2049 nt   +upstreamnt  +downstreamnt
gtggccgacaccagtagttccgagtcgaagaagcccaagaagtccacgtcgggtgaatac
ggcgccgactccatcagcatcctggaaggcctggaggcggtccgcaagcgcccgggcatg
tacatcggctccaccggtgagcgtggtctgcaccacctgatctgggaagtcgtggacaac
tcggtcgacgaggcgatggcgggtcacgccacccgcgtcgacgtgacgatcctcgccgac
ggcggtgtccaggtggtcgacgacgggcgcggcatgccggtcggcatgcacgcctccggc
gtccccgccgtcgaagtgatcatgacgcagctgcacgccggcgggaagttcgactccgat
tcgtatgcggtgtccggcggcctgcacggcgtcggcatctccgtggtcaacgcgctctcg
accaaggtggaactggagatccagcgcgacggccacgtctggacccaagcgtacgactac
gccaagccgaacacgctgaccacgatcggcgacagcaccacgaccggcaccaccgtgcgc
ttctggccggacggcaagatcttcgagaccaccaccttcaacgccgagaccatcgcccgg
cgcctgcaagagatggccttcctcaacaagggcctgaccatcactctgacggacgagcgg
ctcaccgagaacgaggccgaggcagaggtcgagggagaaggcggcgacgccagcctcaag
tcggaagaggagaaggcctccgagctggccaaggtgcgctcgcgggtgtaccactacccg
gagggcctggtcgacttcgtccggcacctcaaccgcaccaagcatccgatccacaacacc
gtgatcgacttcgccgccaagggcgagggacacgaggtggagatcgcgatgcagtggaac
aacggctactccgagtcggtgcacaccttcgccaacaccatcaacacgcacgagggcggc
acccacgaggaaggtttccgcgccgcgctgaccagcacggtcaacaagtacgcgctggac
aagaagctgatcaaggagaaggacggcaagctgaccggcgacgacatccgcgagggactc
gccgccgtcatttcggtgaaggtcgccgatccgcagttcgagggccagaccaagaccaag
ctcggcaacaccgaggtcaagggcttcgtccagcgcacctgcaacgaacacctcggacac
tggttcgaggccaacccggccgaggccaagatcatcgtccgcaaggccgccgattcggcg
caggcgcggatggccgctcgacgcgcccgcgagctggtccgccgcaagaccgccaccgac
atcggcggtctgcccggcaagctcgccgactgccgcagcaacgatccggccaagtgcgag
gtctacatcgtggagggcgactcggccggcggctcggccaagtccggccgcgactcgatg
taccaggcgatcctgccgatccgcggcaagatcatcaacgtcgagaaggcccggatcgac
cgcgtgctgaagaacgcggaggtgcagtcgatcatcaccgcgttcggtaccggcatccac
gacgagttcgacctcgccaagttgcgctaccacaagatcgtgctgatggccgacgccgac
gtcgacggtcagcacatcgcgacgcttctgctgacgctcctgttccgcttcatgcgtccg
ctgatcgagcacggtcacgtgtatctggcgcagccgccgctgtacaagctcaagtggcag
aagggcgccgagccggagtacgcctacagcgaccgcgagcgggacgcgatgctcgaggcc
ggtctggccgccggcaagaagatcaacaaggacgacggcatccagcgctacaagggtctc
ggcgagatgaacgccagcgagctgtgggagaccaccatgaatccggagacccggatcctc
aagaaggtgaccctggacgacgccgccgccgcggacgagctgttctccatcctgatgggg
gaggacgtcgcggcccgtcgcggtttcatcgcccgcaacgccaaggacgtccgcttcctg
gacgtctga

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