Gordonia iterans: C6V83_04980
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Entry
C6V83_04980 CDS
T05370
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
git
Gordonia iterans
Pathway
git03420
Nucleotide excision repair
git03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6V83_04980
03430 Mismatch repair
C6V83_04980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_04980
Enzymes [BR:
git01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6V83_04980
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V83_04980
MMR (mismatch excision repair)
Other MMR factors
C6V83_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVL99724
UniProt:
A0A2S0KDG3
LinkDB
All DBs
Position
1068315..1070795
Genome browser
AA seq
826 aa
AA seq
DB search
MTTSPDQLLDGLNPQQRAAVLHTGSPLLIVAGAGSGKTAVLTRRIAYLLAERDVTPGQIL
AITFTNKAAAEMRERVIELVGPRGNYMWVSTFHSTCVRILRAQASLLVGRNSNFSIYDSD
DQRRLLGMVVRDLELDPKKYSPRGLSTVISNWKNELRSPEEAREQPGDFTPQQGQTVEDV
LDVYAEYQRRLAEANAFDFDDLIGETVALLQRHPDIAEYYRRRFRHVLIDEYQDTNHAQY
MFVRELVGEPGQSGTTPSELCVVGDADQSIYAFRGATIRNIEEFERDYPDAETILLEQNY
RSTQTILSAANAVIAQNPNRRAKKLWTDSGEGDLIVGYVADSDRDEAQFIAKEIDELCES
SIGGSSSASYSDVAVFYRTNTGSRPIEEAFIRHGIPYKVVGGTRFYERKEVRDVVAYLRV
VANPDDSVSLRRILNTPRRGIGARAEACVAVHSENLGISFYQALVDASEGNVALLNTRAV
KQIGGFVELIEGLRRDYLLAFAGDGDEAVADATAEGADIGELVEAIVDRTGYRAELEASN
DPQDGARLDNLNELVAVARDFSVEAAQLIEDGPDDEDEPADTEGQPFDAAQEPPEPGSLA
AFLEKVSLVADADQIPEDGEGVVTLMTLHTAKGLEFPIVFVTGWEDGMFPHQRALGDAAE
LSEERRLAYVGITRARQKLYLTRAILRAAWGQPVENPESRFLQEIPQHLLDWRRTAPRRD
RGYSSGGFGSEGGSRPGAGRPFGFGSASSGPGGMRGRSSYSADPTRGRHKYVAYEIGDRI
NHPKYGMGKAVEKSGSGPTEQIVFDFGGSVGKMRLMTGFGVPGEKL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctcctgaccagcttctcgacggcctcaatccccagcagcgggcggcggtg
ctccataccggatcaccgctgctcatcgtggccggagcgggctccgggaagaccgcggtg
ctgacccggcggatcgcgtatctgctggctgagcgggacgtgacgcccggtcagatcctg
gcgatcacgttcaccaacaaggccgccgccgagatgcgcgagcgggtgatcgagctggtc
ggtccgcgcggcaactacatgtgggtgtcgactttccactccacctgcgtgcgaatcctg
cgcgcgcaggcatcgctgctcgtcgggcgcaactcgaacttctccatctacgattccgac
gaccagcgtcgcctgctcggcatggtggtgcgggatctggagctggatccgaagaagtac
agtccgcgcggactctcgaccgtgatctcgaactggaagaacgagctccggtctccggag
gaggcccgggagcagcccggcgacttcacgcctcagcaggggcagaccgtcgaagacgta
ctcgacgtctacgcggagtatcagcgtcgcctcgccgaggcgaacgccttcgacttcgac
gatctgatcggcgagaccgtcgcactgctgcagcgtcatcccgacatcgccgagtactac
cgccgtcgcttccggcatgtgctgatcgacgagtaccaggacaccaaccacgcccagtac
atgttcgtgcgggaactggtgggcgagcccgggcagagcggcacgacgccgtcggagctg
tgcgtcgtcggcgatgcggaccagtccatctacgccttccgcggtgcgacgatccgcaac
atcgaggagttcgagcgggactaccccgacgccgagacgatcctgctggagcagaactac
cgctccacgcagaccatcctgtcggcggccaacgcggtgatcgcgcagaatcccaaccgc
cgcgcgaagaagctgtggaccgattccggtgagggcgacctgatcgtcggctacgtcgcc
gactccgaccgcgacgaggcgcagttcattgccaaggagatcgatgagctgtgcgagtcg
tcgatcggcggatcgagctcggcgagctactctgacgtcgcggtcttctaccggaccaac
accggttcgcggccgatcgaagaggcgttcatccggcacggcatcccgtacaaggtcgtc
ggcggcacgcgcttctacgagcgcaaagaggtgcgcgacgtcgtcgcctacctgcgcgtg
gtggccaaccccgacgactcggtgagcctgcggcgcatcctcaacaccccgcgccgcggc
atcggtgcgcgggcggaggcctgcgtcgccgtccactcggagaatctggggatcagtttc
taccaggcgctcgtcgacgcctccgaaggcaacgtggcgctgctgaacacccgcgcggtg
aaacagatcggcggcttcgtcgagctcatcgagggcctgcggcgcgactacttgctcgcg
ttcgccggtgacggcgacgaggcggtcgccgatgccaccgccgagggcgccgacatcggc
gagctggtggaggcgatcgtcgaccgcaccggctaccgggccgagctggaggcgtcgaac
gacccgcaggacggtgcccggttggacaacctgaacgagctggtcgccgtcgcccgcgat
ttcagcgtcgaagcggcgcaactgatcgaggacggtcccgacgacgaggacgaacccgcc
gacaccgaaggccagcccttcgacgcagctcaggaaccacccgagccgggatctctggcg
gcgttcctggagaaggtgtccctggtggccgacgcggaccagatcccggaggacggcgag
ggcgtggtgacgctgatgaccctgcacacggcgaagggcctggagttcccgatcgtgttc
gtgaccggctgggaggacggcatgttcccgcaccagcgcgcgctcggcgacgcggccgaa
ctgagcgaggaacgacgactcgcctacgtcgggatcacccgcgcccggcagaagctgtat
ctgacgcgcgcgatcctgcgcgccgcctgggggcaaccggtggagaacccggaatcgcgg
ttcctgcaagagatcccgcagcacctgctcgactggcgacggaccgcaccccggcgggac
cgcggctacagctcgggcgggttcgggtccgagggtggttctcggccgggggcgggccgt
ccgttcgggttcggctcggcctcgtcgggccccggcgggatgcgcggccggtcgtcgtac
tcggcggatccgacgcgcggacggcacaagtacgtcgcctacgagatcggcgaccggatc
aatcacccgaagtacggtatgggcaaggccgtggagaagtcgggcagcggccccaccgag
cagatcgtgttcgatttcggcggctcggtcggcaagatgcgcctgatgacgggcttcggc
gtgcccggtgagaagctgtag
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