KEGG   Gordonia iterans: C6V83_07525
Entry
C6V83_07525       CDS       T05370                                 
Name
(GenBank) siderophore-interacting protein
  KO
K03090  RNA polymerase sigma-B factor
Organism
git  Gordonia iterans
Brite
KEGG Orthology (KO) [BR:git00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:git03021]
    C6V83_07525
Transcription machinery [BR:git03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C6V83_07525
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_3 HTH_Crp_2 HTH_24 KORA GntR HTH_10 LacI HTH_AraC Sigma70_ECF DUF7343 Put_DNA-bind_N TFIIE_alpha
Other DBs
NCBI-ProteinID: AVM02092
UniProt: A0A2S0KK91
LinkDB
Position
1617360..1618049
AA seq 229 aa
MREDAVVLALPLAENVARRFSGRGEPYDDLLQVARLGLIQAVDRFDPRAGSDFLSFAVPT
VMGEVRRHFRDRAPVLRAPRGSRELRDKVFSVREELAQELRSVPTDDDVAARLGVTAAQV
RKALDDCSSTAAVSLDRRLGPEEDGQRLVDRLVTTERGYDRVDDSVRLADAVAGLAPRER
RILGLRFLALKSQSEIADEVGISQMHVSRLLRRSLDELRSRLQPTPAAA
NT seq 690 nt   +upstreamnt  +downstreamnt
ctgcgcgaggacgcggtggtcctggcactcccgctcgccgagaacgtggcccggcgattc
agcggccggggcgagccgtacgacgatctgctccaggtggcccgactcggcctgattcag
gccgtggaccggttcgacccgcgggccggcagcgacttcctgtcgttcgccgtgccgacg
gtgatgggggaggtgcgcaggcacttccgcgaccgggccccggtgctccgggcgccgcgc
ggatcccgggaactgcgcgacaaggtcttctccgtccgggaggaactggcgcaggagctg
cgatccgtcccgaccgacgacgacgtcgccgcccgtctgggagtgacggccgcacaggtc
cgcaaggcgctcgacgactgctcgtcgacggcggcggtgtcgctggaccggcggctcggc
cccgaggaggacggacagcggctggtggaccgtctggtgacgaccgagcgcggttacgac
cgcgtggacgactccgtccgactcgcggacgcggtggccgggctcgcgccccgggagcgg
cggatcctcggtctgcgcttcttagccctcaagtcgcagagcgagatcgccgacgaggtc
ggcatctcgcagatgcacgtctcgcggctgcttcgccgttcgctcgacgagctgcgaagc
cgcctgcagccgacgccggcggcggcctga

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