Gordonia iterans: C6V83_07525
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Entry
C6V83_07525 CDS
T05370
Name
(GenBank) siderophore-interacting protein
KO
K03090
RNA polymerase sigma-B factor
Organism
git
Gordonia iterans
Brite
KEGG Orthology (KO) [BR:
git00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
git03021
]
C6V83_07525
Transcription machinery [BR:
git03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6V83_07525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_Crp_2
HTH_24
KORA
GntR
HTH_10
LacI
HTH_AraC
Sigma70_ECF
DUF7343
Put_DNA-bind_N
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AVM02092
UniProt:
A0A2S0KK91
LinkDB
All DBs
Position
1617360..1618049
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AA seq
229 aa
AA seq
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MREDAVVLALPLAENVARRFSGRGEPYDDLLQVARLGLIQAVDRFDPRAGSDFLSFAVPT
VMGEVRRHFRDRAPVLRAPRGSRELRDKVFSVREELAQELRSVPTDDDVAARLGVTAAQV
RKALDDCSSTAAVSLDRRLGPEEDGQRLVDRLVTTERGYDRVDDSVRLADAVAGLAPRER
RILGLRFLALKSQSEIADEVGISQMHVSRLLRRSLDELRSRLQPTPAAA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcgaggacgcggtggtcctggcactcccgctcgccgagaacgtggcccggcgattc
agcggccggggcgagccgtacgacgatctgctccaggtggcccgactcggcctgattcag
gccgtggaccggttcgacccgcgggccggcagcgacttcctgtcgttcgccgtgccgacg
gtgatgggggaggtgcgcaggcacttccgcgaccgggccccggtgctccgggcgccgcgc
ggatcccgggaactgcgcgacaaggtcttctccgtccgggaggaactggcgcaggagctg
cgatccgtcccgaccgacgacgacgtcgccgcccgtctgggagtgacggccgcacaggtc
cgcaaggcgctcgacgactgctcgtcgacggcggcggtgtcgctggaccggcggctcggc
cccgaggaggacggacagcggctggtggaccgtctggtgacgaccgagcgcggttacgac
cgcgtggacgactccgtccgactcgcggacgcggtggccgggctcgcgccccgggagcgg
cggatcctcggtctgcgcttcttagccctcaagtcgcagagcgagatcgccgacgaggtc
ggcatctcgcagatgcacgtctcgcggctgcttcgccgttcgctcgacgagctgcgaagc
cgcctgcagccgacgccggcggcggcctga
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