Gordonia iterans: C6V83_09305
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Entry
C6V83_09305 CDS
T05370
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
git
Gordonia iterans
Brite
KEGG Orthology (KO) [BR:
git00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
git03016
]
C6V83_09305
Enzymes [BR:
git01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C6V83_09305
Transfer RNA biogenesis [BR:
git03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C6V83_09305
Prokaryotic type
C6V83_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TOBE_3
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AVM00441
UniProt:
A0A2S0KFN5
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All DBs
Position
2034755..2035654
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AA seq
299 aa
AA seq
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MADSTIENAGLLVVDKSAGMTSHDVVSTCRKAFNTRRVGHAGTLDPMATGVLVIGIERAT
KLLGLLSLTTKSYTATVRLGASTTTDDAEGDVLASTDASLATDEQIAAGIAALTGELQQI
PAKVSAIKVDGRRAHALVRTGEEFELAARPVTVHRFQVTAIHRIGGFVDVDVEVDCSSGT
YIRSLARDLGEALGVGGHLTGLRRTAVGPFTLDHARTLDDVVATPGVSLGIDDAAKLCFP
HRAISGDEAESISQGRWLEPVGRKGIYVVVDPDGQAIALVQEKGRRAASVMVVRPATLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccacgattgagaacgccggactgctcgtcgtcgacaagtcggccgggatg
accagccacgacgtcgtgtccacctgccgcaaggccttcaacacccgtcgggtggggcac
gcgggcacgctggatccgatggcgaccggggtgttggtgatcggcatcgagcgcgcgacc
aagctcctcggcctgctgtcgctgaccaccaagagctacaccgcgaccgtccgcctcggc
gcgtccaccacgaccgacgatgccgagggcgacgtgctcgcatccaccgatgcgtcgctc
gcgaccgacgagcagatcgccgcgggcatcgccgcgctcaccggcgagttgcagcagatc
ccggccaaggtcagcgcgatcaaggtcgacggccgccgcgcccacgctctggtgcgcacg
ggcgaggagttcgagttggcggcgaggccggtgacggtccaccgcttccaggtcaccgcg
attcaccggatcggcggtttcgtcgacgtcgacgtcgaggtcgactgctcgtctggaacc
tacatccgctcgctcgcccgcgacctcggcgaggccctgggcgtcggcggacatctgact
gggttgcggcgcacggcggtcggcccgttcaccctcgatcacgcgcgcacgctcgacgat
gtggtggcgacgcccggcgtcagcctcggcatcgacgatgccgcgaagctgtgttttccg
catcgagcgatctccggcgacgaagccgagtcgatcagtcaggggcgctggctggaaccg
gtcggacgcaaggggatctacgtcgtcgtcgatccggacggccaggcgatcgcgctggtc
caggagaagggccgtcgcgccgcatcggtgatggtggtgcggccggcaacgctgcgctga
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