Gordonia iterans: C6V83_09335
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Entry
C6V83_09335 CDS
T05370
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
git
Gordonia iterans
Pathway
git03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6V83_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
git03019
]
C6V83_09335
03016 Transfer RNA biogenesis [BR:
git03016
]
C6V83_09335
Enzymes [BR:
git01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C6V83_09335
Messenger RNA biogenesis [BR:
git03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C6V83_09335
Transfer RNA biogenesis [BR:
git03016
]
Prokaryotic type
tRNA degradation factors
C6V83_09335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AVM00446
UniProt:
A0A2S0KFL1
LinkDB
All DBs
Position
2040519..2042768
Genome browser
AA seq
749 aa
AA seq
DB search
MTDVIEEFDETITEVSCVIDNGAFGKRTIRFETGRLALQAAGAVVAYLDEETMILSTTTA
SKNPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVEG
LRNEIQVVETILSLDPNDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIPTDENKAGQ
WVAFPTVEQLEGAVFDMVVAGRIVSGEGTDADVAIMMVEAEATENVLDLIAGGATAPSET
IVAEGLEAAKPFIAQLCEAQKQLAAASAKETREFPLFPAYQSDVFDAVSDFAAERLNTVL
AIAGKQEREEATDALKADVLAELGPKFEGREGEIGAAFRSLTKKLVRQRILTDHFRIDGR
GITDIRELSAEVGVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS
MGSVCASTLSMLNAGVPLKAPVAGIAMGLVSDEVTIDGKTETRYVALTDILGAEDAFGDM
DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKQARHTILEVIAEAIDEPDEMSPFA
PRITTIKIPMDKIGELIGPKGKTINGITEETGANISIEDDGTVFIGASNGEAAQAAIDKV
NAIANPQLPKVGERFLGTVVKTAPFGAFVSLLPGRDGLVHISKLGNGKRIGKVEDVVNVG
DKLQVEIADIDERGKISLVPVQADAPADA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtcatcgaagaattcgacgagaccatcaccgaggtctcctgtgtgatcgac
aacggcgcgttcggcaagcggaccatccgcttcgagaccggccgcctggctctgcaggcc
gcgggcgccgtcgtcgcgtacctggacgaggagaccatgatcctctccaccaccacggcc
tcgaagaacccgaaggagcacttcgacttcttcccgctcaccgtcgacgtcgaagagcgc
atgtacgccgcgggccgcatccccggctcgttcttccgccgcgagggccgcccgtcgact
gacgcgatcctcacctgccgcctgatcgatcgcccgctgcgcccgtcgttcgtcgagggt
ctgcgcaacgagattcaggtggtcgagaccatcctctcgctcgacccgaacgacctgtac
gacgtcgtcgcgatcaacgcggcctcggcgtcgacccagatcgccggcctgccgttctcc
ggtccggtcggcggcgtgcgcgtcgcgctgatcccgacggacgagaacaaggccggccag
tgggtcgccttcccgaccgtcgagcagctcgagggcgccgtcttcgacatggtcgtggcc
ggtcgtatcgtgtccggggaaggcaccgacgcggacgtcgccatcatgatggtcgaggcc
gaggccaccgagaacgtgctcgacctgatcgccggcggcgcgaccgcgcccagcgagacc
atcgtggccgagggcctggaggccgccaagccgttcatcgcgcagctgtgcgaggcgcag
aagcagctcgccgcggcctcggccaaggagacccgggagttcccgctgttcccggcctat
cagagcgacgtcttcgacgccgtctccgacttcgccgccgagcgcctgaacaccgtgctg
gcgatcgccggcaagcaggagcgggaggaggccactgacgcgctgaaggccgacgtgctg
gccgagctgggtccgaagttcgagggccgcgagggtgagatcggtgcggcgttccgctcg
ctcaccaagaagctggtccgccagcgcatcctgaccgaccacttccgtatcgacggccgc
ggcatcaccgacattcgcgagctctcggccgaggtcggggtcattccgcgggcgcacggc
agtgcactcttcgagcgcggcgagacccagatcatgggcgtcaccacgctcgacatggtc
aagatggcgcagcagatcgactcgctcggtccggagacctccaagcgctacatgcaccac
tacaacttcccgccgtactcgaccggtgagaccggccgcgtcggctcgcccaagcgtcgc
gagatcggccacggcgcactcgccgagcgggccctggtgccggtgctgccgagcgtcgag
gagttcccgtacgccatccgccaggtgtcggaagcactgggctccaacggctccacctcg
atgggctcggtgtgcgcatcgaccctgtcgatgctcaacgccggtgttccgctgaaggct
ccggtcgccggcatcgcgatgggcctggtgtccgacgaggtgaccatcgacggcaagacc
gagacgcgctacgtcgcgctgaccgacatcctcggtgccgaggacgccttcggcgacatg
gacttcaaggtcgccggcaccaaggacttcgtgacggccctgcagctggacaccaagctc
gacggcatcccttcgcaggtgctcgccggcgcgctgagtcaggccaagcaggcccgtcac
accatcctcgaggtgatcgccgaggcgatcgacgagcccgacgagatgagcccgttcgcg
ccgcggatcaccaccatcaagatcccgatggacaagatcggcgagctgatcggccccaag
gggaagacgatcaacggcatcaccgaggagaccggcgccaacatctcgatcgaggacgac
ggcaccgtgttcatcggcgcctcgaacggcgaggccgcgcaggcggccatcgacaaggtc
aacgccatcgccaacccgcagctgccgaaggtgggcgagcgcttcctgggcaccgtcgtc
aagaccgcgccgttcggcgcgttcgtgtcgctgctgccgggccgcgacggtctggtccac
atcagcaagctgggcaacggtaagcgcatcggcaaggtcgaggacgtggtgaacgtcggc
gacaagctgcaggtggagatcgccgacatcgacgagcgcggcaagatcagcctcgttccg
gtgcaggcggacgctccggccgacgcctga
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integrated database retrieval system
