Gordonia iterans: C6V83_11640
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Entry
C6V83_11640 CDS
T05370
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
git
Gordonia iterans
Pathway
git03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6V83_11640 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_11640 (recD)
Enzymes [BR:
git01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6V83_11640 (recD)
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6V83_11640 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
RecD_N
Helicase_RecD
SH3_13
AAA_22
AAA_5
SRP54
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AVM00816
UniProt:
A0A2S0KGM5
LinkDB
All DBs
Position
complement(2531761..2533650)
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AA seq
629 aa
AA seq
DB search
MSGQLVTAETGVLRVFNDAGVFAAADVHVARRVAALSGAAIGDDELVATALAVRAVRTGS
TCVRLNEITAITAERPDDPADDGPAEPEPLPWPEPAALVDTLRRSPLVTGCPSGPLRPLA
LVDSESGPLLYLRKYFRQEQSIRAILDRRRSRRPVVDADRLGRAVDAVFAEAGEHYDRQR
AAAALAATSWTTVLAGGPGTGKTYTVARILAVMEQLLGENARIGLCAPTGRAAAQMQASI
NDYRTGGHRLHHAPVATTVHKMLGSRPDGSFWRGADNRLPYEVVVVDETSMLSVTLMSRL
LEALRPDTRLILVGDPHQLSSVDAGVVLADLVDRAGRVETGLPEEFLAVAPPPEGEFTEA
ERLALADGVITLTRGHRYGGQISAVAAAIQAADGPDGAAEVVDLITGEGAQRFAADTLGR
VVLVDPERTDPVRAQVISWARALHDAAGAGRDRDALAALMRHRVLCAHRDGRYGVSGWSR
RIVDWINEDLGGAIPPTGNYVGEPLLVNKNDVAHRIFNGDSGVVIADGDGRTVVFERGDE
VMRLHPSQVADASPVYAMTIHRSQGSQFGAVTVVLPGVDAQLLTKELLYTAVTRARETVY
IVGTEAELIAAVNRPVQRASGLGLTVREL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcaactggtgacggccgagacaggcgtgctccgcgtgttcaacgacgccggg
gtgttcgcggcggcggacgtgcacgtcgcgcgccgggtggccgcgctcagcggcgccgcg
atcggcgacgacgaactggtggccaccgcgctcgccgtccgggcggtgcggaccgggtcg
acgtgtgtccggctgaatgagatcaccgcgatcaccgccgagcgccccgacgatccggcc
gacgacggaccggcagagccggagccgctgccgtggccggagccggcggcgctcgtcgat
acgctgcggcgttcaccactggtcaccggctgtccgagcggcccgctgcggccgctcgcg
ttggtggattccgaatccgggccgttgctgtacctgcgcaagtacttccggcaggagcag
agcatccgcgcgatcctggatcgtcgccggtcgcggcgtcccgtagtggatgcggaccgg
ctggggcgcgcggtcgacgcagtcttcgccgaggccggtgaacactacgaccgtcaacgg
gcggccgcggcactggcggccacatcgtggacgacggtgctcgcgggcggcccgggaacc
ggcaagacctacacggtggcgcggatcctcgcggtgatggagcagcttctcggtgagaac
gcgcggatcggactgtgtgccccgaccggccgggcggcggcacagatgcaggcgtcgatc
aacgactaccgcacgggcggtcaccggctgcatcacgccccggtcgccaccacggtgcac
aagatgctcggctcgcggccggacggctcgttctggcgcggtgcggacaaccggctgccc
tacgaggtggtggtggtcgacgagacctcgatgctctcggtcaccctgatgagccggctg
ctggaggcgctgcgaccggacacccggctgatcctggtcggtgatccgcaccagctctcg
tccgtcgacgcgggagtcgtgctggccgacctcgtcgaccgggctgggcgggtcgagacc
ggcctgcccgaggagttcctcgcggtggcgccgcccccggagggagagttcaccgaggct
gagcgactggcgctggccgacggggtgatcacgctgacgcgcgggcaccggtacggcgga
cagatctcggcggtcgccgctgcgatccaggccgcggacggtccggacggcgccgccgag
gtggtcgacctgatcaccggcgagggtgcccagcgcttcgctgctgacactctcggccgc
gtggtgctggtggacccggagcggaccgatcccgttcgggcccaggtgatctcgtgggcg
cgggcactgcacgacgccgcaggagcgggccgggaccgcgatgcgctcgccgcgctgatg
cggcaccgggtgctctgcgcgcaccgggacgggcggtacggcgtgtccggctggtcgcgg
cggatcgtcgactggatcaacgaggatctcggcggagcgatcccgccgaccgggaactac
gtgggcgagccgctgctggtgaacaagaacgacgtcgcccaccgcatcttcaacggcgac
tcgggagtggtgatcgccgacggagacggccggacggtggtcttcgaacgcggtgacgag
gtgatgcggctgcacccgagccaggtcgcggacgcgtcgccggtgtacgcgatgacgatc
caccgcagtcagggcagccagttcggcgcggtgaccgtcgtgctgccgggcgtggacgcg
caactgctcaccaaggagctgctgtacaccgcggtgacgcgcgcccgggagactgtgtac
atcgtcggcaccgaagccgagctgatcgccgcggtgaaccgcccggtccagcgagccagc
ggtctgggcctgaccgtccgcgagctgtag
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