Gordonia iterans: C6V83_11650
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Entry
C6V83_11650 CDS
T05370
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
git
Gordonia iterans
Pathway
git03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6V83_11650 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_11650 (recC)
Enzymes [BR:
git01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6V83_11650 (recC)
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6V83_11650 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Abhydrolase_9
Motif
Other DBs
NCBI-ProteinID:
AVM00818
UniProt:
A0A2S0KGK4
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All DBs
Position
complement(2537201..2540575)
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AA seq
1124 aa
AA seq
DB search
MLTVHRAERADVLADVLAGQLAVPPADPMARETVAVPARGVERWLQQRLALRLGGTGRSD
GIAANIDFPSPERLLRQVVLATADDPDAAEPWYSDRLVWPVLHVLDDEIGDPRLAVLRNH
LGGEDRRGRRLAAASVIAGLFAGYGWQRPAMLVEWAAGHDTDGTGGADGPGRPLPEGFTW
QPWLWRRVRDRIGQPHLAEQLDAVAARLAAEPALVELPERLAFFGPTRIPESLRRLLGAL
AAGRDVSLFLPHPSEALWRAVAETAGPVPRPRDRRTGPRPEHPLLAVLARDVCELQEVLG
PLRAREVYHPLPAADATSSTVLAAVQEGLRCDRLETVPGAVADDSLEVHACHGPERQVEV
LRDRLLRLFDDHPELQPRDVVVMCPDVETFAPLIAGTFGQAGRDHPGYSLRVKLADRGLR
ETNEVLDVLAAVLDLAAGRVRSGDLLDLIAQPAVRRCFELTDDDLELLAGWVERAGIRWG
IDGTQRDRFGLAGFPQGTAVAGRDRVLLGVLAEETSNEWLGVGLPLDGIESTKIDLAGRF
AEFVDRLGALLAAMDTPRPAPEWAQLLVEAVDRLTAAGRETQWQRAQAVEMIGESLGSAG
ARGVTLALADLRDLMDGLLAARPTRSNFRTGELTVCTLTPMRSVPHRAVVLLGMDSGAFP
RGSAVDGDDVLARLPLIGERDRHDEDRQVFLDALTAAQDHLLVFYTGSDPVTGGDVPPPV
VVEELIDTAGRILGGSAPGVVIRHTLHPFDERNFLVGRDGGPRSYDARLLHGARELARLN
ASGAPGSRPALLRDAVLPPRGDADDIDLAALIDFFAAPTERFVRQRLGAMLPRRDETHPD
QLEVDLDGLAQWKIGDRHLRGFLGGEDPRVLGAAELRRGSLPPFAIGAALLAPIEEKAQA
IGQLAQTHRAHDHGDTVDVLHELPDGRRLYGTVGDVFDEQLVAVTYSRLKPGHRLSAWIR
LLAIAVGASRTVTEAVVVGGGRGRRAEMRRLRLPDDPGEILRRLIAVRDAGLRAPLWLPP
AAAEAAARGYASGRPAIALKAVRGLGRWEFKDPYAGLVLDDDPDPERVLPVDALIGMAGA
APFVELAPELPEVVEHDGHTPAGQSFVRLARAVFGPLLAEESQR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggtgcatcgcgcagaacgggccgatgtgctcgccgacgtgctggccgggcag
ctggcggtgccgccggcggatccgatggctcgcgagaccgtcgccgtcccggcgcggggc
gtggagcggtggctgcagcagcggctcgctctgcggctcggcggcaccgggcgatccgac
ggcatcgccgccaacatcgactttccctccccagaacgtctgctccgccaggtcgtgctg
gctaccgccgacgatcccgacgccgctgagccctggtattccgaccgtctcgtgtggccg
gtgctgcacgtgctcgacgacgagatcggcgatccacggctcgcggtgctcaggaaccac
ctcgggggcgaggaccggcgcgggcggcgcctcgccgccgcgtcggtgatcgccggtctc
ttcgccgggtacggatggcagcgtcccgcgatgctcgtcgagtgggccgccgggcacgac
accgacgggaccggcggcgccgacgggcccggacgtccgctgccggaaggcttcacctgg
cagccctggttgtggcgccgggtccgggaccgcatcgggcagccgcatctggccgagcag
ctcgacgccgtcgccgcgcgactcgccgccgagcccgccctggtggagctgcccgagcgg
ttggccttcttcggtcccacccggataccggagtcgctgcggcggttgctgggcgcgctc
gccgccggtcgcgacgtgtccctgttcctgccgcatccctcggaggcgctgtggcgcgcc
gtcgccgagaccgccggcccggttccgcgtccccgcgaccggcgcaccggtccgcggccc
gaacatcccttgctggcggtgctggcccgcgacgtctgcgaactgcaggaggtgctgggc
ccgctgcgggcccgggaggtgtatcacccgctgccggcagccgacgcgacgtcgtccacg
gtcctggccgcggtccaggagggactgcggtgcgaccgtctggagaccgtgcccggcgcc
gtcgccgacgactccctcgaagtccatgcttgtcacggaccagaacgccaggtggaagtc
ctccgggaccgactgctgcggctcttcgacgatcatccggagctgcagccgcgcgacgtg
gtggtgatgtgcccggacgtggagaccttcgcaccgctgatcgcgggaacgttcgggcag
gccggccgcgaccatccggggtactcactgcgcgtcaagctcgccgaccgcggtctgcgc
gagaccaacgaggtcctcgacgtgctcgccgccgtgctggatctggcggcagggcgggtc
cgttccggggatctgctcgatttgatcgcgcagccggcggtccggcgctgcttcgagctc
accgacgacgacctcgagctcctcgccgggtgggtcgagcgggcgggaatccgctggggg
atcgacggcacgcaacgggatcgtttcgggctggccggctttccgcagggcaccgccgtc
gccggtcgggaccgggtgctgctgggggttctcgccgaagagacgtccaacgagtggctc
ggcgtcgggctgcccctcgacgggatcgagtcgaccaagatcgaccttgcgggtcgcttc
gccgagttcgtcgaccgtctcggcgcgctgctcgccgcgatggacacgccgcgaccggcg
cccgaatgggcgcagctcctggtcgaggcggtcgaccggctgaccgcggccgggcgcgag
acccagtggcaacgggcccaggccgtcgaaatgatcggcgagtcgctcggttcggccggc
gcccggggcgtcacgctcgcgctggcggatctgcgcgacctcatggacggcctgctcgcc
gcgcgcccgacccgctccaacttccgcaccggggagctgacagtgtgcacgctcacgccg
atgcgatcggtgcctcaccgtgcggtggtgctgctaggtatggacagcggcgcgtttccg
cgcggctcggcggtcgacggcgacgacgttctcgcccggctgccgctgatcggagagcgg
gaccggcacgacgaagatcggcaggtcttcctcgacgccctcactgcagcgcaggatcac
ctgttggtcttctacaccggctccgatccggtgaccgggggagacgtgccgccgccggtg
gtcgtggaagagctgatcgacacggcgggacggatactcggcgggagcgcgccgggtgtg
gtgatcagacacacgctgcacccgttcgacgaacgcaacttcctcgtgggccgcgacggc
ggcccgcgtagctatgacgcccggttgctccacggcgcccgggagctcgcccggctgaac
gcgtccggggcgccgggctcccggcccgcacttctgcgggacgccgtgctcccgccgcgc
ggggacgccgacgacatcgacctcgccgcgctgatcgacttcttcgccgccccgaccgaa
cggttcgttcgacagcgtctcggcgcgatgctgccgcgacgcgacgagacgcatccggac
caactcgaggtggatctggacggtctggcgcaatggaagatcggcgaccggcacctgcgc
gggttcctcggcggcgaggacccgcgggtgctgggcgccgccgaattgcggcggggctcg
ctgccgccgttcgcgatcggagcggcgctgctggccccgatcgaggagaaggcgcaggcc
atcggtcaactcgcccagactcatcgtgcacatgaccacggcgacaccgtcgacgtcctc
cacgaactgcccgacgggcggcggttgtacggcaccgtcggcgacgtgttcgacgagcag
ctcgtcgcggtgacctactcgcggctgaagccgggccacaggttgtcggcgtggatcagg
ctcctcgcgatcgcggtcggcgcgtcgcggaccgtcaccgaggcggtcgtggtcggcggg
ggccggggccgtcgggccgagatgcgccggctgcgcctgccggacgatccgggagagatc
ctgcggagactgatcgccgtgcgcgacgccggccttcgggcgcccctgtggctgccgccc
gccgcggccgaggcggccgcgcgcggctatgcctcgggccggccggcgatagcgctcaag
gccgtccgcgggctgggcaggtgggagttcaaggacccgtacgccggactggtcctggac
gacgatcccgaccccgagcgggttctgccggtcgatgcgctgatcggcatggcgggcgcc
gcgccgttcgtcgagctggcgcccgagctgcccgaggtcgtcgaacacgacggtcatacc
ccggccggacagagcttcgtacggttggcccgcgcggtgttcggaccgctcctggcggaa
gagagccagcgatga
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