Gordonia iterans: C6V83_12015
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Entry
C6V83_12015 CDS
T05370
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
git
Gordonia iterans
Brite
KEGG Orthology (KO) [BR:
git00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
git03036
]
C6V83_12015 (xerD)
Chromosome and associated proteins [BR:
git03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C6V83_12015 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
TPR_9
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AVM02209
UniProt:
A0A2S0KKK9
LinkDB
All DBs
Position
complement(2617534..2618457)
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AA seq
307 aa
AA seq
DB search
MIARLDDAVQRYLDHLTVERGSAANTVSSYRRDLVRYKDFLASRGISTLSEVAEADVREF
LVALRRGDPERDVPPLADSSVARTLVATRGFHKFAAAEGIVADDVAHAVRPPKPAQRLPK
ALAVDEVLAILEAAGAPDHPRALRDRALLELLYSCGARISEVTALDVDDIDTEHRAVVLR
GKGGKERIVPVGRPAIAAVDAYLVRGRPALAKKGTPALFLNIRGGRLSRQSAWQVLVDAA
ARAGVEKEVSPHTLRHSFATHLLDGGADVRVVQELLGHSSVTTTQVYTLVTVNTMREVYA
TAHPRAR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcccgactcgacgacgcggtgcagcgctatctcgaccacctgacggtggagaga
ggttctgcggccaacacggtgtcgtcgtatcgtcgcgacctggtgcggtacaaggacttt
ctggcctcgcggggaatctcgacgctcagcgaggtcgccgaggccgatgtgcgggagttc
ctggtggctctgcgcaggggagacccggagcgggacgttccgccgctcgcggactcgtca
gtggcgcgaactctggtggcgaccaggggatttcacaagttcgctgcggcggaggggatc
gtcgccgacgacgtcgcgcatgcggtacgtccgccgaagccggcgcagcgactgcccaag
gcactcgccgtggacgaggtgctcgcgatcctcgaggcggctggagcgccggatcaccca
cgcgcgcttcgcgatcgtgcgctgctggaactgctgtacagctgcggtgcgcggatttcc
gaggtgacggcgctggacgtcgacgacatcgacaccgagcaccgcgccgtggtgctgcgc
ggcaagggcggcaaggagcgcatcgtgccggtcgggcgaccggcgatcgcggccgtcgac
gcctacctggtgcgcggacgtccggcgctggccaagaaggggaccccggccctgtttctg
aacatccgcggcggtcggctgtcgcgccagagcgcgtggcaggtgctggtcgatgcggcg
gcacgcgcgggcgtcgagaaggaagtctccccgcacaccctccgccacagcttcgccacc
catctcctcgacggcggcgcggacgtgcgcgtggtgcaggagttgctgggccattcttct
gtgacgaccacccaggtgtacacgctggtcacggtgaacaccatgcgggaggtgtacgcc
accgcgcacccccgcgcgcgatag
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