Gordonia iterans: C6V83_12355
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Entry
C6V83_12355 CDS
T05370
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
git
Gordonia iterans
Pathway
git03030
DNA replication
git03410
Base excision repair
git03420
Nucleotide excision repair
git03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6V83_12355 (polA)
03410 Base excision repair
C6V83_12355 (polA)
03420 Nucleotide excision repair
C6V83_12355 (polA)
03440 Homologous recombination
C6V83_12355 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
git03032
]
C6V83_12355 (polA)
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_12355 (polA)
Enzymes [BR:
git01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6V83_12355 (polA)
DNA replication proteins [BR:
git03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C6V83_12355 (polA)
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C6V83_12355 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V83_12355 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AVM02217
UniProt:
A0A2S0KKK6
LinkDB
All DBs
Position
complement(2693770..2696616)
Genome browser
AA seq
948 aa
AA seq
DB search
MSPAKTSSSTSTRSKPAARPTLMLLDGHSLAYRAFFALPAENFQTNTGQATNAVYGFTSM
LINLLRDEDPTHIAAAFDVSRQTFRSEMFPEYKAQRSKSPDEFRGQVDLTKDVLDAMGIP
VIAIEGYEADDVIATLATRADAEGYRVLVVTGDRDSLQLVNENITVLYPKRGVSELTRFT
PEEVEKKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSFEELVDRADEV
RGKVGDSLRENLAAVIMNRRLTELVRDMDLPTGPDDLALHGWDRDRIHRLFDDLEFKVLR
DRLFSTLTSVEPEADSGFEVSGTRLGTGEVRAWLDDHARSGRSGLAVTGPQRVFGSEAVG
IAVAAADGEAAFVDPVTLSPDDDAALGEWLAAEDRPKAVHEVKWAIHALRGRGWTLAGVT
SDTALAAYLVRPGQRTFNLDDLALRYLRRELKADTAGDDGQLSLLDGEEDESAVSNQLML
SAQAVAELADTLDVELERIDSVALLRDMELPLAFVLAGLEAAGIAVDLDHLEGLEREFAQ
RVRDAAESAYEVIGEQVNLGSPKQLQVVLFDKLGMPKTKKTKTGYTTDADALASLYEKTE
HPFLKFLLEHRDATRLKVTVDGLLKSVADDQRIHTTFNQTVAATGRLSSTEPNLQNIPVR
TDAGRQIRGGFVVGSASSPGGTASSLVEPVETATSPGGTAPSPGGTAPSLVEPVETYECL
MTADYSQIEMRIMAHLSGDEGLIEAFNSGEDLHNFVGSRAFGVPIDQVDAQLRHRVKAMS
YGLAYGLSAFGLAAQLGISRDEARDQMDQYFARFGGVRDYLHEVVVEARRKEYTETMFGR
RRYLPDLNSDNFQRRQAAERMALNAPIQGTAADIIKVAMIKVAERIEREELASRMLLQVH
DELVVEVASGERERIEAVVREEMGSAIELSVPLDVSVGFGRSWDDAAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcgaagacatcgtccagcacttccacccgcagcaagccggccgccagaccg
acgctgatgctgctcgacggccattcgctggcctaccgggcgttcttcgcgctgccggcc
gagaacttccagaccaacaccgggcaggcgaccaacgccgtctacggattcacctcgatg
ctgatcaacttgctgcgcgacgaggacccgacgcacatcgcggcggcgttcgacgtctcc
cgccagaccttccgctcggagatgttccccgagtacaaggcgcagcggtccaagtcaccg
gacgagttccgcggccaggtcgatctgaccaaggacgtgctcgacgcgatgggcatcccg
gtgatcgccatcgaaggctacgaggccgacgacgtgatcgccaccctcgccacgcgcgcg
gacgccgagggctatcgggtcctcgtagtcaccggcgaccgcgactcgctgcagctggtc
aacgagaacatcaccgtgctgtaccccaagcgcggcgtctccgagctcacccggttcacg
ccggaggaggtcgagaagaagtacggcctcaccccggcccagtatccggactacgcggct
ttgcgcggcgatcccagtgacaacctccccggcatcccgggcgtgggggagaagaccgcg
gccaagtggatccgcgagtacggctcgttcgaggaactggtcgaccgcgctgacgaggtg
cgcgggaaggtcggtgattcgctgcgcgagaacctcgccgccgtcatcatgaaccgtcgc
ctgaccgagttggtccgggacatggacctgccgaccggaccggacgacctcgccctgcac
ggctgggaccgcgaccgcatccaccgattgttcgacgatctcgaattcaaggtgctgcgc
gaccgtttgttctccacgctcacctccgtggagcccgaagcggactccggattcgaggtc
agcggcacccggctcggaaccggcgaggtccgcgcctggctcgacgaccacgctcgctcg
ggccgcagcggcctggcggtgaccgggccccagcgcgtcttcggttcggaggccgtcggg
atcgccgtcgcggccgccgacggggaggccgccttcgtcgatccggtcaccctgagcccc
gacgacgacgccgcgctgggcgagtggctcgccgccgaggaccggcccaaggcggtccac
gaggtcaagtgggcgatccacgcgctgcgcggccgggggtggacgctggccggtgtcacc
tcggacaccgcgctggcggcgtatctggtccgtcctggacagcgcacgttcaacctcgac
gacctcgccctgcgttacctgcgccgggagctgaaggccgacaccgcaggcgacgacggc
cagctgtcgctgctcgacggcgaggaggacgaaagcgcggtgagcaaccagctgatgctg
tccgcgcaggctgtggccgaactcgccgacaccctcgacgtcgagttggagcggatcgac
tcggtggcgctgctgcgggacatggagcttccgctggcgttcgtcctggcgggcctcgag
gcggcgggcatcgccgtggacctcgatcacctggagggactcgagcgcgagttcgcgcag
cgggtgcgcgatgccgcggagtcggcgtacgaggtgatcggcgagcaggtgaacctcggc
tcgccgaagcagctgcaggtggtgctgttcgacaagctcggcatgccgaagaccaagaag
acaaaaaccgggtacaccacggacgcggacgcgctcgcgtcgctgtacgagaagaccgag
caccccttcctgaagttcctgctggaacaccgggacgcgacccgcctgaaggtcaccgtc
gacggtctgctcaagtcggtcgccgacgatcagcgcatccacaccaccttcaaccagacg
gtggcggcgaccggacggctctcgtccaccgaaccgaatctgcagaacatcccggtccgg
accgacgcaggtcggcagatccgcggcggcttcgtcgtcggctccgcctcgtcgccgggt
gggactgcctcgtcgctggttgagcctgtcgaaaccgccacttcgccgggcgggactgcc
ccttcgccgggtgggactgccccttcgctggttgagcctgtcgaaacctacgagtgcctg
atgaccgcggactactcacagatcgagatgcggatcatggcgcacctgtcgggtgacgag
gggctgatcgaggccttcaactcgggcgaagacctgcacaacttcgtcggctcccgggcg
ttcggcgtgccgatcgatcaggtcgacgcgcagctgcggcaccgggtcaaggcgatgtcg
tacggtctcgcgtacgggttgagcgccttcggtctggcggcccagctcggcatcagccgt
gacgaggcccgcgatcagatggaccagtacttcgcacgcttcggcggcgtccgggactac
cttcacgaggtggtggtggaggctcgccgcaaggagtacaccgagaccatgttcggccgg
cgccgatatctgcccgacctgaactccgacaatttccagcgccgccaggccgccgaacgg
atggcgctcaacgcgccgattcagggcaccgccgccgacatcatcaaggtcgccatgatc
aaggtggccgagcgcatcgagcgcgaagagctcgcgtcgcggatgctgctccaggtgcac
gacgagctcgtcgtcgaggtggcgtccggcgagcgcgagcggatcgaggcggtggtccgc
gaagagatgggttcggcgatcgagttgtccgtgccgctggacgtgtcggtgggcttcggc
cgttcctgggacgatgcggcgcactga
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integrated database retrieval system