Gordonia iterans: C6V83_12765
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Entry
C6V83_12765 CDS
T05370
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
git
Gordonia iterans
Pathway
git00470
D-Amino acid metabolism
git00550
Peptidoglycan biosynthesis
git01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
git00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C6V83_12765 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C6V83_12765 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
git01011
]
C6V83_12765 (murD)
Enzymes [BR:
git01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C6V83_12765 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
git01011
]
Precursor biosynthesis
Amino acid ligase
C6V83_12765 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AVM00996
UniProt:
A0A2S0KH67
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All DBs
Position
complement(2786049..2787587)
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AA seq
512 aa
AA seq
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MTFSTDPLVLDGAHVLVAGAGTTGAAVVAALDQFGARSVLVDRRFGDCENERERDPEGYL
AAPGAFVGVDLVVTSPGFPPVDRFLVAARAAGIPVWGDVELAWRLDRAGLTGPTRTWLVI
TGTNGKTTTTAMTESILRAAGVPVRACGNIGLPVVAALLEEPRAAVLAVELSSFQLHWAP
SVRPRAGVVLNVAADHLDWHGSFEAYRDAKAQVLGGEVGVVGLDDEVAASLPVGPGTRRV
GFTLAAPAPGELGLDGGPRAGVLVDAAFADDGCPRALGTAPAELCAAGRVRPAGPSGISD
ALAAAALTRSIGVAADAVERGLRQFSPAAHRGQTVAEIDGIRFVDDSKATNPHAAQAALN
AHDRVVLIAGGLLKGAPVDELIAGSAEQLAGVVAIGRDREVIVDAIARHAPQVPVVTVFT
GDDGAVIIHRAFNTVSVPAAPGLPAADAVMAQAVGEAWSLSQAASGTEAVLLAPAAASLD
MFASYGARGDSFAAAAAALAAEAGGRTADAER
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgttctccactgatccgctggtgctcgacggcgcacacgttctggtggccggcgcg
ggcacgaccggcgccgccgtggtggccgcgctcgaccagttcggtgcgcgcagtgtcctc
gtcgatcgtcgattcggcgactgcgagaacgagcgcgaacgtgacccggaaggctatctg
gccgcgccgggcgcattcgtcggcgtcgatctggtggtcacctccccgggctttccgccc
gtcgaccggttcctggtggccgcccgggcggccgggatcccggtgtggggcgacgtggag
ctggcctggcgcctggatcgggccgggctcaccggaccgacccggacgtggctggtgatc
accgggaccaacggcaagaccacgacgacggcgatgaccgaatcgatcttgcgtgcggcg
ggtgttccggtgcgggcttgcggcaacatcgggttgccggtggtcgcggcgctcctcgag
gagccgcgcgcggcggtgctcgcggtggagctgtcgtcgttccagctgcactgggcgccg
tcggtacgcccccgagccggtgtggtgctgaacgtggccgccgaccacctcgactggcac
ggctcgttcgaggcgtaccgcgatgcgaaggcgcaggtgctcggcggcgaggtgggcgtg
gtcggcctggacgacgaggtggcggcgagcctgccggtggggcctggcacccggcgggtc
ggattcactctcgctgcgccggcgccgggcgagctcggactcgacggcgggccgcgcgcc
ggggtgctggtcgacgcggccttcgccgacgacggctgcccgcgtgccctcgggaccgct
cccgccgagttgtgcgcggccggacgggtgcggccggcgggtccgtcggggatctcggat
gccctggccgcggcggccctcacccgatcgatcggggtcgcggcggatgcggtcgagcgc
gggctgcgccaattctcgcccgcggcccaccggggtcagaccgtcgccgagatcgacggg
atccgcttcgtcgacgactccaaggcgaccaacccacacgcggcgcaggccgcgctcaac
gcgcacgaccgcgtcgtgctgatcgccggcggactgctcaagggcgccccggtcgacgag
ctgatcgccggttcggccgagcaactggccggagtggtggcgatcggccgggaccgggaa
gtgattgtggacgcgattgcgcgacacgccccacaggtcccagtagtcacagtgttcaca
ggggacgatggtgcagtgatcattcatcgcgccttcaacaccgtgtcggtgcccgctgca
ccgggtcttccggccgccgatgccgtgatggcacaagctgtcggcgaggcctggtcgctg
tctcaggccgcctccggcaccgaagccgttctcctcgcgccggccgcggcgtccctggac
atgttcgcctcgtacggcgcgcggggggacagtttcgcggccgcggcggcggcgctggcc
gcggaggccggcggccgtacggcggacgcggagcgctga
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