Gordonia iterans: C6V83_15405
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Entry
C6V83_15405 CDS
T05370
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
git
Gordonia iterans
Pathway
git03420
Nucleotide excision repair
git03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6V83_15405
03430 Mismatch repair
C6V83_15405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_15405
Enzymes [BR:
git01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6V83_15405
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V83_15405
MMR (mismatch excision repair)
Other MMR factors
C6V83_15405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AVM01421
UniProt:
A0A2S0KIF4
LinkDB
All DBs
Position
complement(3338419..3340599)
Genome browser
AA seq
726 aa
AA seq
DB search
MTVREGAVHQGAVREGAVREGAVREGARRAPSTPGPGARAGNREHGPAVDGLDPQQLEAV
RAPRGPVCVLAGAGTGKTRTITRRIAALIETGQVNPSQVLAVTFTARAAAEMRDRLAVLG
VSVPGRQVAALTFHAAALRQLRYFWPSVFGSSHWELMDSKFPMVRRALRDADVGSADREL
IRDLAAEIEWAKSSLVSPDRYPDAARGRDLPLNAATVAEVFRAYEDGKAGPGGDRLLDFE
DLIGFTAEILNSVPAVAEEFRSRYRSFVVDEYQDVTPLQQLLLSAWLGGRDDLTVVGDAN
QTIYSFTGATPDYLLSFTRTYPEATLVRLERDYRSTPQVVALANGVIGRTRGRAAGTRLE
LIGQRPDGPEPVFAEYPDETAEVVGVVAQIKRLLRAGVAADEIAVLYRINVQSQPYEEAL
AAAGIAYRVRGDLGFFQRPQVAAALRKLASLAQGPPPPMETAEAIRRALTPLGYGQTEPS
GVAARVNWQQMRRLVELGDEVLADRPGLSFAEAVAAVHDRARTGGDGGRGVTLASMHAAK
GLEWDAVLLTGLHEGSVPLGRASKTAAEVEEERRLLYVGVTRAREHLHLSWSLARAEGRP
STRRRSRFLDGLVPQAERSGRSSAAAAGAVGGGTEPAAGPDRAVHDALTDWRAEYAADHG
IAPWNVCSGNALKQLARGLPATAGELRRVSGMTAERVEQFGAEILAVIAAHRDSGGAQDG
KRAGQK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcgagagggtgccgttcaccaaggtgccgttcgagaaggtgccgttcgagaa
ggtgccgttcgagaaggtgcccgccgcgcgccgagcaccccgggacccggtgcgcgtgcc
gggaatcgggagcacggcccggcggtcgacgggctcgatccgcagcagctcgaggccgtt
cgggcgccccgtggcccggtgtgcgtgctggccggcgccggcaccggcaagacccggacc
atcacccgccggatcgccgcgctgatcgagaccggccaggtgaacccgagtcaggtgctc
gcggtgaccttcaccgcccgggcggccgcggagatgcgggatcgtctcgccgtgctcggt
gtctccgtcccgggccggcaggtcgcggcgctcaccttccatgcggcggcgctgcgccag
ctccgctacttctggccgtcggtgttcgggtcgtcgcactgggaactgatggacagcaaa
ttcccgatggtgcgccgtgccctgcgcgatgccgacgtcggcagcgccgaccgcgagctg
atccgggatctggcggccgagatcgaatgggcgaagtcgtcgctggtgtctccggaccgc
tacccggatgcggcacggggccgggacctgccgctcaacgccgccacggtcgccgaggtg
ttccgggcctacgaggacgggaaggccgggcccgggggcgaccggctgctcgacttcgag
gatctcatcgggttcaccgccgagatcctgaactcggtgccggccgtcgccgaggagttc
cggtcgcgctatcgcagcttcgtcgtcgacgagtaccaggacgtgacccccctccagcag
ctgttgctgtccgcgtggctgggcgggcgcgacgatctcaccgtcgtgggcgatgcgaac
cagaccatctacagcttcaccggggccaccccggactacctgctgagcttcacccgcacc
tacccggaggcgactctggtccggctggaacgggactaccggtcgactccgcaagtggtg
gccctggccaacggcgtgatcgggcgaacgcgcggccgggccgcaggcacccggctggag
ctgatcggacagcgcccggacggacccgaaccggtgttcgccgagtatcccgacgagacc
gccgaggtggtcggggtggtcgcgcagatcaagcggctgctgcgtgccggggtcgcggcc
gacgagatcgccgtgctgtaccggatcaacgtgcagtcgcagccctacgaggaggcgctg
gccgcggctgggatcgcctaccgggtgcgcggcgacctcggcttcttccagcgaccgcag
gtggcggccgcgttgcgcaagctcgcgtcactcgctcaggggcccccgccgccgatggag
accgccgaagcgatccgccgggcactgaccccgctcggctatggccagaccgagccgtcc
ggcgtcgcggcccgcgtcaactggcagcagatgcgccggctggtggaactgggcgacgag
gtgctggccgaccggcccggactgagtttcgccgaggccgtcgcggccgtgcacgatcgt
gcccgcaccggcggcgacggcggacgcggcgtcacgctggcgtcgatgcatgcggccaag
gggctggaatgggatgcggttctgctgaccgggctccacgagggctcggtgccgttgggg
cgggccagcaagaccgcggccgaggtggaggaggagcgtcgcctgctctacgtcggtgtc
actcgcgcccgcgaacacctgcacctctcgtggagtctggcccgggcggagggccgcccg
tcgacgcgtcgtcgttcccggttcctcgacgggctggtgccgcaggctgagcgatcgggc
cggagctcggcggcggccgccggcgcggtgggcggcgggaccgaaccggccgccgggccg
gaccgcgcggtgcacgacgcgctcaccgactggcgggcggagtacgccgcggaccacggc
atcgccccatggaacgtctgcagcggaaacgcgctcaagcagctcgcccgcggactcccg
gcgaccgccggggagttgcgccgggtcagcggcatgactgccgagcgcgtcgagcagttc
ggcgccgagatcctggccgtgatcgctgcgcaccgcgactccggcggcgcccaagacggt
aaacgcgcaggtcaaaaatag
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