Gordonia iterans: C6V83_15750
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Entry
C6V83_15750 CDS
T05370
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
git
Gordonia iterans
Pathway
git03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6V83_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
git03021
]
C6V83_15750
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_15750
Enzymes [BR:
git01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6V83_15750
Transcription machinery [BR:
git03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6V83_15750
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6V83_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AVM01480
UniProt:
A0A2S0KIH5
LinkDB
All DBs
Position
complement(3413967..3415019)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPILSEEVIAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPQE
ADHIAAFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHGLGLSLKDSPASFDPSQVAGYDPATGTWSDEASYTDDSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccattctgtccgaagaggtcatcgccgagaaccggtccaag
ttcgtcatcgagccgctggagccgggcttcggctacacgctcggcaactcgctgcggcgc
acgctgctctcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggcgtgctc
cacgagttcaccaccgtcccgggtgtgaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtcagttcggaagaggacgagccggtcaccatgtacgtccgcaagcag
ggtcccggtgcggtcaccggcgccgacatcgtgcccccggccggtgtcacggtgcacaac
ccggacctgcacatcgcgaccctcaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggccaccggtgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtcctcaaggtgacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgatcgtctggtgctcgacgtggagaccaagaac
tccatcaccgcgcgggacgccctggcgtcggccggtaagaccctggtcgagctcttcggc
ctggctcgggagctcaacgtcgaggccgagggcatcgagatcggcccgtcaccgcaggaa
gctgatcacatcgccgcgttcagcctgccgatcgaggatctggagctgaccgtccggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagttggtggcccgtaccgag
tcggacctgctcgacatccgcaacttcggtcagaagtcgatcgacgaggtgaaggtgaag
ctgcacggtctgggtctgtcgctcaaggacagcccggccagcttcgatccgtcgcaggtc
gccgggtacgatccggccaccggtacctggagtgacgaggcgtcgtacaccgacgactcc
ggtgaagatttcgccgagaccgagcagctgtag
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