KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107105866
Entry
107105866         CDS       T04299                                 
Symbol
RAB5B
Name
(RefSeq) RAB5B, member RAS oncogene family
  KO
K07888  Ras-related protein Rab-5B
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04137  Mitophagy - animal
gja04144  Endocytosis
gja04145  Phagosome
gja04148  Efferocytosis
gja05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107105866 (RAB5B)
   04145 Phagosome
    107105866 (RAB5B)
   04137 Mitophagy - animal
    107105866 (RAB5B)
   04148 Efferocytosis
    107105866 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107105866 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gja04131]
    107105866 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gja04147]
    107105866 (RAB5B)
   04031 GTP-binding proteins [BR:gja04031]
    107105866 (RAB5B)
Membrane trafficking [BR:gja04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107105866 (RAB5B)
 Endosome - Lysosome transport
    107105866 (RAB5B)
Exosome [BR:gja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107105866 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   107105866 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   107105866 (RAB5B)
  Exosomal proteins of melanoma cells
   107105866 (RAB5B)
GTP-binding proteins [BR:gja04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107105866 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 107105866
NCBI-ProteinID: XP_015261396
UniProt: A0ABM1JIV9
LinkDB
Position
Un
AA seq 215 aa
MTSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALAGNKADLANKRMVDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTGGAVGRNRGVDLHEQSQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaccagcagaggagctgccaggccgaatggtcagtcacaagccagcaagatctgtcag
ttcaagctagtactgctgggtgaatcagcggtaggcaagtccagcctggtgctgcgtttc
gtcaagggtcagttccacgagtaccaggagagcaccataggtgcggctttcctcacacag
tctgtctgcctagatgatacaacggtaaagtttgagatctgggacacagctggccaggaa
agataccacagtttggcccccatgtactaccgaggggctcaagctgccattgtggtgtat
gacataaccaaccaggaaacatttgcacgagcaaagacatgggtgaaagaactccagcgg
caagctagtcccaacattgtcattgccttagcgggaaacaaggctgatcttgccaacaag
cgcatggtagattatgaagaggcccaggcctatgcagatgacaacagtctattgtttatg
gagacatcagccaagacagcaatgaatgttaatgatctcttcctggcgatagctaagaag
ctgccaaagagtgagccccagagcacaggtggtgccgttggtcggaatcgaggtgtggac
cttcacgagcagtcccagcagaacaagagccagtgttgtagcaactaa

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