Gekko japonicus (Schlegel's Japanese gecko): 107106145
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Entry
107106145 CDS
T04299
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer 1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03015
mRNA surveillance pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107106145 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
107106145 (ACIN1)
03015 mRNA surveillance pathway
107106145 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107106145 (ACIN1)
03041 Spliceosome [BR:
gja03041
]
107106145 (ACIN1)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107106145 (ACIN1)
Spliceosome [BR:
gja03041
]
Complex C
Other components
EJC/TREX
107106145 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
107106145
NCBI-ProteinID:
XP_015261742
UniProt:
A0ABM1JJV5
LinkDB
All DBs
Position
Un
AA seq
1230 aa
AA seq
DB search
MADGEEVTLDGRPLQALRVADLKAALEQRGLAKSGQKSALIKRLRGALMLEKLQKHSTPH
TTFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAADSEGKGCVVSRERGESDE
EGARRPEQHPSRVRQARAVKAPGGTHNLGSEERETSLRSRRAVQRVPVKDEEEDEEEEEE
EEEDDEEEEEEEEDSAPLLKGQAEPERAALPERSLGQASTPVAPEAPLKEPQTLEAQGCE
AAVPLPSLSKSPVEKQVGPAAPECREEEQVTLLPEPQEGKEGPGPPEEKEPVEAIESEAA
AEPPEVHEERPAEAAKKKEGQGVAEIRGTPEEVAEASRGEESAGPLQPHPEVEEPLRPED
QEEAAEALRTLEEAAAAAAAIVQVSPSPPQLMEAQHPQQDHAADEPPPPILTMEAPPGSS
PAEDEAPPQLSRPSPPSQELPAPASPSIPGDQAGRSPSPLPLPQHHHRQRPGGDSSSRSS
SSSASSSSRSRSHSRGSSQPRSRTRRPRSGSSESPPRKRRASRSRSGSECHTSSCSKSRS
RSRSRSRSSSESSRKSRSPEASRDSASYPPTKEPSPPGESPPAHQDASSSPREEGRRTPS
PPLDPQRHPSHTQEHEAELESTVPERDHSESSFSTEAPGLDSRAPVSEPQDPPEGQHSKN
EEKQEVPMEQSEPRPESEAPEPGSDDHPSAEPSGPDVVPEDEEKKEGSSQPKAFKRKISV
VSSAVAKGTPATNSDVEGSQPGGRKRRWGASTATTQKKPSISITTESLKSLIPEIKPPPG
GQEVVVDLHADDSHISEDEAERHAEEPAHEKALKICRTVTQVVPAEGQENGQGEEEEEEE
KAREEEPPEAPPVVAVEATVVLPPPVEHEVKKVTLSDTLTRRSISQQRSGVSITIDDPVR
TAQVPSPPRGKVSSIVHICNLVRPFTLGQLKELLGRTGTLVEDAFWIDKIKSHCYVTYST
VEEAVTTRNALHGVKWPQSNPKFLSADFAEQDELDFHRGLLAERPAEAKADEPLPLPGLG
PAARGEREMSRRTEAREREAAVREQWAEREREMERRERTRAEREWDRDKVREGPRSRSRS
RERRRKERPKSKEKKAEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDTQYVQKQAE
RAARARERERRRKELEEEEARQQERSRQAEREKRREHSRERERERPNASGGGGASRGGER
SSGRDRERREAKTRRSRSRSTPVQDRGGRR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggaggaggttactctggacgggagaccgctccaggcgctgagggtcgcc
gacctgaaggcggctttggagcagcgcggcctggctaagagcggacagaagagcgcgctg
atcaagcgccttcgcggggccctgatgcttgaaaaactccagaagcactcgacaccccac
accaccttccaacccaactcccagattggcgaggagatgagccaaaacagcttcatcaaa
cagtacttggaaaaacagcaagagctgctccggcagcgcctggaacgggaggcccgggaa
gctgcagattcagagggcaagggatgcgtcgtgtcccgggagaggggagagtctgacgaa
gaaggagcccgaagaccagagcagcatccttcccgggttagacaggccagagccgttaaa
gcccccggaggtacccacaacctgggcagcgaagagcgggaaacatctcttaggagtcgg
agggctgtccagcgggtgcccgtgaaagacgaagaagaggacgaggaggaagaggaggag
gaagaggaggacgatgaggaggaggaagaggaagaagaggactccgcgcctctgctgaag
gggcaggccgagccggaaagggcggctctcccagagcggagcctgggccaggcttccaca
cccgtcgctccagaggccccgctgaaagagcctcagaccctagaggcccagggctgtgaa
gcagccgtgccactcccctccctctccaagagtccggtggagaagcaggtcgggcccgcg
gcgccggaatgcagggaagaggagcaggtcactctcctcccagaaccccaggagggcaag
gagggccctgggccgccagaggaaaaggaacctgttgaagccatagaatcggaagctgca
gccgagccaccagaagtccacgaggagagaccggcagaagcagccaaaaaaaaagagggg
caaggggtggccgagatccgtgggacacccgaggaggtggcagaggcaagtcggggggag
gagagtgctggtcctctgcagccccacccagaggtggaggagcccctaaggccggaagac
caggaggaagccgcagaggccctgaggacgctggaggaggcggcggccgcggcagccgca
atagtccaggtgtccccgtcacctccccagctgatggaagcgcagcacccccagcaagac
cacgccgcagacgagccccctcctcccatcttgaccatggaagccccgccgggatccagc
cccgccgaagacgaggccccccctcagctctctcggccgtctcccccctctcaggaactc
ccagccccagccagccccagcatcccgggggaccaggccggccgctcgccctcccccttg
ccgctcccgcagcaccaccaccgccagaggccagggggcgacagctcctcccgctcctcc
tcctcctcggcatccagctcctcccggtcccgctctcactcccggggcagttcgcagcca
cggtcccgcaccagaagaccccgctcgggctcctccgagtcgcctccaaggaaacggcgg
gcctcgagatcccgctccggctctgagtgccacacgagttcctgctccaagtctcgctct
agatcccgttctaggtcccgctccagcagcgagagcagcaggaagtcccggagccccgaa
gcttcgagggacagcgccagctaccctcccaccaaagagccctccccgccaggggagagc
cccccggcccaccaggacgcgtcgtcaagtcccagggaagagggaaggagaaccccttcc
ccacctctggaccctcagagacaccccagccatacccaggagcacgaagcggagttggag
agcacagtgccggaacgagaccactcagagtcctccttttccacggaggctccgggccta
gacagcagggctcctgtctcagagccacaggatccaccggaggggcagcacagcaaaaac
gaggagaagcaagaggtgcccatggagcagtctgagccccgtcccgagagcgaggccccc
gagcccggctccgacgaccacccttctgccgagcccagcggccccgacgtggtccctgaa
gatgaggagaagaaagagggttcatcccagcctaaggccttcaagagaaagatctctgtt
gtctcgtcggcagtggccaaggggacgccagcgaccaacagcgacgtggaaggaagccag
ccaggaggccggaaacggcgctggggggccagcacagccaccacgcagaagaaaccttcc
atcagcatcaccacagagtccctcaagagcctgatccctgagatcaagccaccgccgggg
ggccaagaagtggtggtggaccttcacgccgacgactcgcacatctcggaagacgaggcc
gagcggcacgcagaggagccggcccacgagaaagccctcaagatctgccgcaccgtgacg
caggtggtgccggcggagggccaagagaatggccaaggagaggaggaggaagaggaggag
aaggcccgcgaggaggagccgccagaggcccctcccgttgttgccgtggaggcgacggtg
gtgctgccaccacctgtagaacatgaagtcaaaaaagtcacactgagcgatacgctgaca
aggcggtcgatcagccagcagcgctcgggcgtctctatcaccatcgacgaccctgtccgc
acggcccaggtcccctctcccccacgcggtaaggtcagcagcatcgtccacatctgcaac
ttggtgagacccttcactctggggcagctgaaggaactgctgggccggacgggcaccttg
gtagaggatgccttctggatcgacaagatcaaatcccactgctatgtcacgtattcgacg
gtggaggaagccgtcacaacgcgcaacgccctccacggggtcaagtggccacagtcgaac
cccaagttcttgtcggctgacttcgctgaacaagatgagctggatttccaccggggtctg
ctggccgagcgccccgcagaagccaaggcggacgaacccttaccgctcccaggactcggc
ccggcagcccgaggggagcgggagatgtcccggcgcactgaagcaagggagcgggaggcg
gccgtgcgggagcagtgggctgaacgggagcgggagatggagcgccgggaacggacgcgg
gccgagagggagtgggaccgcgacaaggtgcgggaggggccgcgctctcgctcccgttcc
cgggagagacgccgcaaggagcggcccaagtccaaggagaagaaagccgagaagaaggaa
aaggcccaggaggagccaccggccaagctgctcgatgaccttttccgcaaaaccaaggcc
gctccgtgcatctactggcttcccctcacagacacccagtacgttcagaagcaggcagag
cgagcggcccgagcccgggaacgggagcgccggcgcaaagagctggaagaggaggaagcc
cgccagcaagagcgcagccgccaagcggagcgagagaagcggcgggagcacagccgggaa
cgggagcgcgagcggcccaacgcctcaggaggaggcggggccagccggggaggcgagcgc
agcagcggccgggatcgcgagcggcgcgaggccaagacccgccggagccggagtcgcagt
acacctgtacaggacaggggggggcgccgctga
DBGET
integrated database retrieval system
