Gekko japonicus (Schlegel's Japanese gecko): 107106682
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Entry
107106682 CDS
T04299
Symbol
RB1CC1
Name
(RefSeq) RB1 inducible coiled-coil 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107106682 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gja01009
]
107106682 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107106682 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
gja03029
]
107106682 (RB1CC1)
Protein phosphatases and associated proteins [BR:
gja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107106682 (RB1CC1)
Membrane trafficking [BR:
gja04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107106682 (RB1CC1)
Mitochondrial biogenesis [BR:
gja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107106682 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
107106682
NCBI-ProteinID:
XP_015262355
LinkDB
All DBs
Position
Un
AA seq
1734 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENAYSNYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRECLERLDSSAEHEVTEGEDTENEKSA
EVVLSPDMFKTNKQSLLSSCCKSVEHSTLDGTVSEKMNENKEASQNPSVQDSEMSAELGE
SDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWASALIKDGKHLYDAEKAKRETF
GKLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSVITPRMES
TTGTIATSPRTPPSLSLQGPLCPPECPPGPIEELSPDSIDAHTFDFETIAHPSIEHGLKQ
GSLDLDSLAESPESDFMSAVNEFIIEENPASPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTNICAKRAALENSAINVYMAKCRVAAQESQLNLRNFKEDLCHFRTFVEKEQCDFSSS
LKCTSIEIRNIIEKVKLSLEKTLKEKHQKELQSVKMEYESRMNILVEDGEENKKKITKLK
LDLKSLEDVLHDKDDEFAIVKNEKEAVVCLQNEKDEKLLELECQMKNQCCEIKELRESRE
SALENLKKLHIETGEKMQLLRAELQSLEQDHLKELEASLQVRRTQEFEVLMAEHSDCLEK
LIKENQCRLEQMQESHAVDIQEKEKQIEELKLKVSELSDLRCKLEVELALKEAETDEMKL
LLEESKTQQQDNLQSVIDKETDILRKEIDKLNHLIKINDEEYQIGLAELRTLMTTEKDQC
ISELIGRHEEETHLLKTELNKVTSLHQKAFEAEKRLEEQITELQGKLELAVTALEKQKEE
NLALCEQQKKYEATINKFEEEKQLLVTNHEEDRKLLVEKLSCEKEDAVRIALKEFELHRE
AVEKELLEKIQTLEMQVNQSSSESSASSLVAELQEKLQEEKQKFLEQLEEHEKRKNEEMQ
NIRTSLTAEQQTTFNTVLTREKMKKENIINDLSDKLKMITQQQERDKDLIETLSEDRARL
LEEKKKLEEEVNKLRSSSSIPSTYLAPTSEPSGACAADFTADTERLTSDVPEEGKMDSVM
ETSMMAVNENAQMLSEEKQRIMLLEKTLQLKEEENKRLNQRLDTLGHVSMSTTASALSAV
LSPISTHVDINRPMLKRSAQTSQSLAHTPSKKCREDASSQSGDENPDPPVEPSPPQQLGN
DLPISPSEDLKSYGDFIKWMANTLTLSTVQPLPTVTDSVFDIVQMDTSTATALLITSVRL
QAAKVPWSHPTSTPVSSRTVDHIFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLTA
LDLKPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatatgtatttctggtcaacactggaaccacccttacgtttgatacagaactt
gcagtacaaaatgttgccgaccttaaacaagcaattcaaaccaagtacaagattgctatt
caacatcaggtgctggttgtcaatggaggggagtgtatggcagctgacaggaaagtttgt
agttacagcgctggaacggacacaaacccaatttttctcttcaacaaagaaatgatctta
tgtgaacgtcctccagctatccccaaaacgacattttcagcagaaaatgagatggaatta
aaagtcgaagaatctcttatgatgcctgcagtttttcacacggtagcttcacggacacag
cttgctgtggaaatgtatgagattgccaagaaactttgttccttctgtgaaggtctcgtc
catgatgaacatcttcagcaccaaggctgggctgccataatggcaaatttggaagattgc
acatattcctaccaaaagctgcttttcaagtttgaaaatgcatattcaaattacctgcag
tccatagatgatattaagctgaaacttacacatttaggggctgctgtttccataatggcc
aagatcccactgctggagtgcctaaccagacatagttacagggaatgtttggaacggctg
gattcttctgctgaacatgaagtgacagaaggtgaagacactgagaatgagaagtcagct
gaagtggtgctttctcctgacatgtttaaaacgaacaaacaatcactgctgtcctcatgt
tgcaaatcagtagaacattcaaccctagatggcacagtttctgaaaaaatgaatgaaaat
aaggaagccagtcaaaatccttcagtccaggacagtgaaatgtcagcagagctgggagag
agtgatctaccttctttcaatgtttctctattagactggataaatgttcaagatagaccc
aatgacgtcgaatccttggtcaggaaatgttttgattctatgaacagacttgacccgagg
attattcagccctttttggccgaatgccgacagactattgccaaattagataatcagaac
atgaaggccattaaggggcttgaagacaggctttatgccttggaccagatgatagctagt
tgtagcaggctggttaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagcagagaacttgaaagatccttctgtgttacctgatttgtgtttaagtcatgcaaat
caattgatgattatgttaactaaccacaggaaacttttagatattaaacagaaatgtact
actgccaaacaagaacttgcaaataacttacaagtccgactgaaatggtgctgctttgta
atgcttcatgctgaccaagatggagagaaactgcaagccttgcttcgtctcgtaacagag
ctgctagaacgagtgaagatagtagagaagcttagtaatgtccctcagatgtactgtttg
gctgttgttgaagttgtaaggaggaagatgtttgtaaaacactacagggagtgggctagc
gctttaataaaagatgggaaacacctttatgatgcagaaaaggccaaaagggaaactttt
gggaaattatttaggaagtcttttctaagaaatcgtttgttcagaggtcttgatgcctgg
cctccatcattttgtactcggaaacctcgcagatttgatagtgaacttcctgatatctca
ttatctgatctgcagtttctacagtccttttgtccttcagaagtccaaccattactcagg
gttcccatactttgtgattttgaacctctccaccagcatgtacttgctctacataacctg
gtcaaagcagcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaa
caaaaggcttccaacagtcaagcttccccacaatctgttattaccccaaggatggaaagt
acaacaggaacaattgctacctctcctagaactcctccatcgcttagccttcagggtcct
ctttgccctcctgagtgcccccccggtccaatagaagaattgtctccagacagtattgat
gctcatacgtttgactttgaaacaattgcccatccaagtatagagcatggtctgaaacaa
gggtcattagacttggactcactggcagaaagtccagaatctgactttatgtcagcagtg
aatgagtttataatagaagaaaatccagcatctccaaatgtgataagtgatccacaaagt
ccagaaatgatggtggagtccctgtattcctcagttatcaatgcaatagatagtaggcgg
atgcaagacacaaatatttgtgcaaaacgagcagccctagaaaattctgctataaatgtt
tacatggcgaaatgtagagttgctgcccaggaatctcagttaaatctaagaaacttcaaa
gaagacctttgtcactttagaacatttgtagaaaaagaacagtgcgacttttctagttct
ttaaaatgtacttcaatagaaatacgaaacattatagaaaaagtaaaactgtctcttgaa
aagacactaaaagaaaagcatcaaaaagaactgcagtctgtaaaaatggaatatgaaagc
agaatgaatattttagttgaagatggtgaggagaacaaaaaaaagattacaaaattaaag
ttagacttgaaaagtcttgaagatgttttgcatgataaagatgatgagtttgcaatagta
aagaatgaaaaggaagctgtcgtatgtttacagaatgaaaaagatgagaagctgctcgaa
ttggaatgccaaatgaagaatcaatgttgtgaaattaaagaattaagggaatctcgtgaa
agtgcattagaaaatctgaaaaaacttcatatagaaactggtgaaaaaatgcagcttttg
agggcagaacttcagagtttggagcaagatcatttgaaggaactagaagccagtcttcag
gtcagacgtacacaagaatttgaagtgctaatggctgaacacagtgattgtttagagaag
ttaataaaggaaaaccaatgccgacttgaacagatgcaggaatctcatgctgtagacatc
caagaaaaagaaaaacagattgaggaactaaagctcaaggtttctgaactgtctgacttg
agatgcaaattggaagttgaacttgctttgaaagaagcagaaacagatgaaatgaaacta
ctcttagaagaaagcaaaactcagcagcaggataacttacaatctgttattgacaaggaa
acagacattttaagaaaagagattgataaattgaaccatttaataaaaattaatgatgag
gaatatcagataggattagcagagctaagaactttaatgactactgagaaagatcagtgc
atttcagaattaattggcaggcacgaagaagaaacacatttgcttaaaactgagttgaac
aaagtaacttctttgcatcagaaagcttttgaagctgaaaagaggttggaagaacaaata
acagaattgcaaggtaagctagaattggcagtgactgccctggagaagcaaaaagaggag
aatttggccctatgtgaacagcaaaaaaaatatgaagccactatcaataagtttgaagaa
gagaaacagctgttggttactaaccatgaggaagacaggaagctgcttgttgagaagctc
agttgtgaaaaagaagatgcagtacgaattgccctgaaagaatttgaattacatcgggaa
gctgttgaaaaagaactgttggaaaaaattcagacacttgagatgcaggttaatcagagt
tcgtctgaatcatctgcgtcaagcttggttgctgaacttcaagaaaaacttcaggaggag
aaacagaagtttttggagcagcttgaagaacatgagaagaggaaaaatgaggaaatgcaa
aacattcgaacatcactcactgcagaacagcagactaccttcaatactgttctaacaaga
gaaaaaatgaaaaaagaaaacataataaatgatcttagtgacaaattaaaaatgattaca
caacagcaagaaagggataaggatttgatagaaactctttctgaggaccgagctcgttta
cttgaagaaaagaagaaacttgaagaagaagttaataagctgagaagtagtagttctatt
ccatcaacttatttagctcctacttcagaaccttctggagcttgtgcagcagattttaca
gcagacacggagcgattgacatcagatgtacctgaagagggaaaaatggattctgtaatg
gaaaccagcatgatggctgtaaatgaaaatgctcagatgttgtctgaagaaaagcagagg
ataatgttgttagaaaaaacactgcagttgaaagaagaggaaaataagaggcttaatcaa
agattggacactttggggcatgtgtcaatgtcgactaccgcctcggcattgtcagctgtg
ctgtccccaatatcgactcacgtggatatcaaccgcccaatgctgaaacgctcagcccag
acatctcagtccttagcccatactccctccaaaaaatgcagagaagatgcctcctcccaa
tcaggggacgaaaaccccgatcctccagtggaaccctcgccgcctcaacaattgggcaat
gatcttccaatctccccttcggaagacttgaaatcctacggagatttcatcaagtggatg
gctaacacgctcactctgtctacagtacagcccctgcctactgtgacagactctgtgttc
gatatcgtccagatggacacttctacagctactgcgttactgattacttcggtccgcctt
caggcagctaaagtcccatggtctcacccgacatctacacccgtctcgagccggacagta
gatcatatttttcaggttggcgatttggttctcattattttggatgaacgccatgacaac
tatgtattatttaccgttagcccaactttgtatttcttgcactcagaatctcttactgca
ctggacctcaaaccagcttcaggtgcatctagaagaccctgggtgctagggaaagtaatg
gaaaaggaatattgccaggctaaaaaggcacaaaacagatttaaagttcctctaggtaca
aaattctacagagtaaaagcggtgccatggaacaagaaagtataa
DBGET
integrated database retrieval system
