Gekko japonicus (Schlegel's Japanese gecko): 107106758
Help
Entry
107106758 CDS
T04299
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
107106758
NCBI-ProteinID:
XP_015262433
LinkDB
All DBs
Position
Un
AA seq
1715 aa
AA seq
DB search
MAAVAAAAREAPWRRLSGLSFGVYRAAELGKLSVKSITNPHFLDNAGTALPNGLYDLALG
PLDNKEVCATCVQDFNNCPGHLGHTDLPLTVYNPLFFDKLFLLIRGSCLSCCHLTCPRAV
IHLLLNQLKLLGAGLLEAVCDLEAVLSRFLEENVGASEIDIEEMLSQHTKEILQKNQLTD
QGSHHVKNVCECRNKLISQFWKLHTGSKRCPNCKAARSLVRKEHNSKLTVTCPTVVIQKS
GKPVIVEESAAIDDTQLGKRGYLTPSTAKDHIEALWKNEGFFLSMLFSGMMVSGDSTFNP
EMFFLDKLVVPPSRYRPVNCIGDQMFANGQTVNLQAVMKDAQVARKLLAFMAQDLKQSMQ
NEEEDMQQPGEQPLEPLDRYVLSTIPGQTMADKLYNIWIRLQSHVNILFDSDTDKLMSEK
YPGVRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVT
PWNVHELRQAVINGPGVHPGASMVINEDGSRTILSAASQTQREAIAKQLLTPSTGTPKPG
IKTVCRHIXXXXXXXXNRQPTLHRPSIQAHRARILPEEKVLRLHYASCKAYNADFDGDEM
NAHFPQNELGRAEGFLLACTDEQYLVPKDGKPLAGLIQDHMVSGTSMTTRGCCFTREQYV
ELVYQGLTDKKGRVKLLPPAIMKPQHLWTGKQVVSTLLANVIPEDWPPLNLSGRAKIDGR
AWVTASEPSMHSSGLNFMCESQVIIQNGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETS
GKVLTALARLFTAYLQFYRGFTMGVEDILVKPQADHKRRKIMKDCTRRGRKAIKAAFNLP
ETSSSEQAQGKWQDAHLCRDQGNFNMVDLRFKEEVNHHSNEINKACMPLGLHRRFPENNL
QLMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFSPRSGGFVMGR
FLTGIKPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLIVHYDLTVRDSDGSI
VQFLYGEDGLNVPKIQFLQPKQFPFIVDNYKVIEKSKHLDEVLLKTDPRHAKEQFSSVKR
WRIRHQQPCRKGAFLLFSQKKLASGTPQVPSGELVNGREPKTLQLLERWYGLNETRRCKY
QKKAAKCPDPCLGIWQPDIYFASVSETFEKDVENFLTEWNTPNKLGYCKPELSSERLRDL
LHLKWQQSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVA
SAKIKTPMMSVPVLNTKAAHKRVKGLKKQLTRVCLGEVLQKVDIRESVCLENKLSKHRTY
TIKFTFLPYECYREEMFVKPRDILDFMETSFFRILLETIKRRSSKLISYNSVSTQRANDR
DSGGDREGGASHENQDDPEAEEEGRALDGGIDEGDADATDAKRREKQEEEVDYESDDGAA
EEDEIPDTEEAAVCDSDRDPEAAEDQQDPPSPSLSQQVQTKRKNKRKTSDKLTHLRVNSV
LESHSAIESYAYDTDQELWCEVSLKLPLSKEYFDMASLLTSLANKTVLHETKGITRCLLN
EATNSNGEKALTLQTEGINLPELFQYTEILDLKRLYCNDIHAMANTYGIEAALKVLEKEI
KDVFAVYGIAIDPRHLSLVSDYMCFEGAYKPLNRFGMQSSASPLQQMTFETSYKFLKEAA
MLGSHDELQSPSACLVVGKVVKGGTGFFELKQPLK
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcggcggcggcccgggaagcgccgtggcggcggctgagcggcttgtct
ttcggcgtgtaccgggcggcggagctcgggaagctgagtgtaaaatcgataaccaatcct
catttcctggacaatgcagggactgcattacccaatgggttgtatgatttggctttggga
ccgcttgacaacaaggaagtgtgtgcaacttgcgtacaggactttaacaactgcccaggg
cacctgggtcacacggacctgcctctcactgtgtataatcctctcttttttgataaatta
ttccttctgatacggggttcttgcttgagctgttgccacctgacatgtccacgggctgtg
attcatttgctgctgaaccagctgaagctcttgggtgcagggctgctggaagccgtctgt
gaccttgaggccgtcctgagcaggtttttagaggaaaatgtaggtgcatctgagatagac
atagaagaaatgttaagccagcacacaaaagaaattctccaaaaaaaccagctaacagac
caaggttcacatcatgtaaaaaacgtatgtgagtgtagaaataaattgatctcccagttt
tggaaattacacaccggttcaaagagatgccccaattgcaaagctgcaagatcccttgtc
cgcaaagagcacaatagcaaactcactgtgacttgccccacagtggtcatccaaaagtca
ggcaaaccagtgatcgtggaggaatcagcagccatagatgacactcaactgggaaaacga
ggttacctgacacctagcactgccaaagaccatattgaagctttgtggaagaatgaaggc
tttttcctcagcatgcttttctctggcatgatggtcagtggagattcaactttcaatcct
gagatgttcttcctggataaacttgttgttccgccatctaggtatcgcccagtgaattgt
attggcgaccagatgtttgcaaacggtcaaacggtgaacttgcaagctgtcatgaaagat
gcccaggtggcacggaaacttctggctttcatggctcaagatctaaagcaatcgatgcaa
aatgaagaggaggacatgcagcagccaggagagcagcccttggagcccctggaccgttat
gtcttgtcaacaattcctgggcagacgatggcagataagctgtacaacatctggattcgt
cttcagagccatgtcaatattttgtttgacagtgacacggacaagctaatgtcagaaaaa
taccctggtgtgcgtcagattttggaaaaaaaggagggcctgttccgcaaacatatgatg
ggaaagcgagtggattatgcagctcgatcagtcatttgccccgacatgtacattgggacc
aatgagatcgggattcctatggtctttgccaccaaactgacctatcctcagcctgtaact
ccttggaatgtccatgaattgaggcaagctgttattaatgggcctggtgtgcatccaggt
gcctccatggtcatcaacgaagacgggtctcgcaccatcttgagtgcagccagccagacc
caaagagaagccatcgccaagcaactcttaactccttccactgggacaccaaagccaggg
ataaaaactgtgtgccgccatattnnnnnnnnnnnnnnnnnnnnnnnnaatcgccagccc
acccttcacaggccctccatccaagcccaccgagccaggattctacccgaggagaaggtt
ctgaggctccactatgccagttgcaaagcctacaatgcggactttgacggggacgagatg
aacgctcacttcccccagaacgagctcggccgagcagaaggcttcctcttggcttgtact
gatgagcaatatctcgttccaaaggatgggaagccattagcaggcttgatccaagatcac
atggtctccggtaccagcatgaccacacggggctgctgctttacccgagagcagtacgtg
gaactggtgtatcaagggctgaccgacaaaaaggggagagtgaagcttctgcctccagcc
attatgaaaccacagcatttgtggacaggaaagcaggttgtttctacattgctggcaaat
gtaattccagaggactggccgccactgaatctgtcggggagagctaaaattgacggcaga
gcctgggtgacagcctctgaacccagcatgcactcctcaggcctcaactttatgtgtgaa
tctcaggtgatcatccagaatggggagctgctgtgtggggtcctggacaaagctcactat
ggcagctctgcctacggtttggtccactgctgccacgaggtctacggtggcgagacgagt
gggaaggtgctgacggccctggcacggctcttcacggcttacttgcagttctacaggggc
tttacaatgggagttgaggatattttggtcaaaccacaagcagaccataaaagacggaag
atcatgaaagattgtacccgtcgtggcaggaaggccattaaagctgcatttaacttgccg
gaaacctcatcctctgagcaggcccaggggaagtggcaggatgcccacctctgcagagac
cagggaaactttaatatggttgatttgcgattcaaagaggaagtgaaccatcacagcaat
gagattaacaaggcctgcatgcctcttgggcttcaccggcgtttcccagaaaacaattta
cagttgatggtgcagtcaggagccaaggggtctactgtgaacactatgcagatttcttgt
ttgctgggccagattgagttagaaggtcgaaggcctccactgatgccatctggcaaatcg
ttgccatgtttccagccttatgacttttcccccagatcaggggggtttgtgatggggaga
tttctcacaggcatcaagcctgcagaattcttcttccactgcatggctggtagagaggga
ctggtagatacagctgtcaaaaccagccgatctggataccttcaaaggtgtgtcataaag
catttagaagggctgatcgttcattatgacctgactgtgagagacagcgatggcagcatt
gtgcagttcctctacggagaggatggcttaaatgtccccaaaatacagttcctgcaaccc
aagcagtttcctttcattgtcgataactacaaggtaatagagaaatctaagcatttagat
gaagttctgttaaaaacagatcctcggcatgcaaaggaacaattcagctctgtcaagcga
tggcgaatcaggcaccagcagccttgcagaaaaggagcttttttgctgttttctcagaaa
aagctggcgagtggaacaccccaggtccctagtggagaactcgtgaacggccgagagcct
aaaactctgcagttgctggagaggtggtacggactgaatgagacaagacgatgcaagtat
cagaaaaaggcagcaaaatgtcccgatccttgcttgggtatctggcagccagacatctat
tttgcatcggtgtcagaaacatttgaaaaggacgtagagaatttcctcacagaatggaac
actccgaataaacttggctactgtaaacctgaactttcttcggagagattaagggacttg
ctgcatttgaagtggcagcagtcactctgcgatccaggagaggccgtgggtcttctcgct
gctcagagcattggggagccttccacacagatgacgctcaacactttccacttcgctgga
cgaggcgaaatgaatgtcacactcggtatcccaaggttgcgggagatcctgatggtagcc
agcgctaagattaaaaccccgatgatgagcgttcctgtgctcaataccaaggcggctcac
aagagggtgaagggactcaagaaacagctcaccagagtgtgcttaggcgaggtgttacag
aaagtggatattcgggagtctgtatgtctggagaataagctaagcaagcaccgcacctat
accatcaaattcacttttttgccatatgaatgttaccgggaagagatgttcgtgaagccg
agggacatcttggactttatggagacaagtttcttcaggatcttactggaaacaattaag
aggaggagttcgaagttgatctcgtacaacagtgtcagtactcagagagcaaatgacagg
gattcaggtggtgacagggaaggtggagcatcccacgagaaccaggatgaccctgaagcc
gaggaagaagggagagctcttgacggtggaattgatgaaggggatgctgatgctacagat
gcaaaaagaagggagaagcaggaagaggaggttgattatgagagcgatgatggtgctgcg
gaggaggatgaaattccagatacggaagaggccgccgtgtgtgacagcgacagggaccca
gaagcagcggaagatcagcaggatcctccctctccttccttgagccagcaggttcagacg
aagagaaagaacaagagaaagacatcagacaaattgacccatctccgagtgaatagcgta
ctggagagtcacagcgctattgagagctatgcgtatgacacagatcaggaactgtggtgt
gaggtctctctgaaactcccgctgtcaaaggagtactttgacatggcctccctgctgacc
tccttggcaaacaaaactgttctccatgagacgaaggggatcacccggtgtctcttaaat
gaagccaccaacagcaatggagagaaggcactcactctacagactgaggggataaacctc
cccgaactctttcagtacactgagattttggatctaaagaggctttattgcaacgatatt
cacgcaatggctaacacctatggcattgaggccgccttgaaagtccttgagaaagagatt
aaagatgtgtttgctgtgtatgggattgcaatagatccccgacacctctctctcgtgtca
gactacatgtgctttgaaggtgcttacaagcccctcaatcggtttgggatgcagtccagt
gcttccccgttgcagcaaatgacatttgagaccagctacaagttcttgaaggaagcagcc
atgctagggtcccatgatgagctgcaatctccttccgcttgcctggtagttggaaaagtt
gtcaaaggagggaccggcttctttgagctcaagcagcctcttaaatag
DBGET
integrated database retrieval system
