Gekko japonicus (Schlegel's Japanese gecko): 107107415
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Entry
107107415 CDS
T04299
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107107415 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107107415 (SMARCC1)
03036 Chromosome and associated proteins [BR:
gja03036
]
107107415 (SMARCC1)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107107415 (SMARCC1)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107107415 (SMARCC1)
PBAF complex
107107415 (SMARCC1)
GBAF(ncBAF) complex
107107415 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
DUF919
PAT1
Motif
Other DBs
NCBI-GeneID:
107107415
NCBI-ProteinID:
XP_015263201
LinkDB
All DBs
Position
Un
AA seq
617 aa
AA seq
DB search
FLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPM
AMGPPPTPHFNVLADTPSGLMPLHLRVPQIPAAQQMLNFPEKNKEKPTDLQNFGLRTDIY
SKKTLAKSKSASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVR
EEVPLELVEAHVKKVQEAARVSGKLDPTYGLESSCIAGTAPEEPEKLDGPEEEKMETEAD
GPPAEKVKVENKGENEIDGNKVLEGEEERHAEKEQDGDVPLDPKPDEREAEENKENLDVC
KDKDSDAGKKRAEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMK
KLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQLEQQHSQN
AQQSHQHSSGPGMNPLGTPPGHSGLMAPQQPPPYPMMHHQMPPPHPPQPGQILGPGSMIP
GQPVPGGRMMQAGAANSGSAGAPQPATAPAAGSIAGPRGALASPNGLYPPPPQPPAPPPA
DGVTPPPAGAPPASTAP
NT seq
1855 nt
NT seq
+upstream
nt +downstream
nt
attcttagcttaccgcaatttcatgatcgatacctatcgcttgaaccctcaagagtacct
gaccagcactgcctgccgaaggaacttgacaggggatgtttgtgcagtaatgagagtgca
cgccttcctggagcagtggggactcattaattaccaagtggaccccgaaagccggcccat
ggccatgggccctcctcccaccccgcatttcaacgtgctcgccgacaccccttcggggct
tatgccacttcatcttcgcgtgcctcagatcccagctgctcaacagatgttgaatttccc
tgagaaaaacaaggaaaaacctactgatctgcaaaactttgggcttcgcacagatatata
ctcaaagaaaacattagcaaagagcaaaagcgccagcgctgggcgagaatggacagaaca
ggagactctgctgctgcttgaggctttggaaatgtacaaagatgactggaataaagtgtc
agagcatgtcggaagccgcactcaagacgagtgcatcctccatttcctgagacttcccat
tgaggacccttacttggagaactcggacgcctccctgggccccctggcttaccagcctgt
gcccttcagccagtctggaaacccggtgatgagtacagtcgctttcctggcatctgtcgt
ggatccccgcgtggcgtctgctgcggctaaagcagctttagaggagttttcccgggtccg
agaggaagtgcccctggaactggttgaggcccacgtcaagaaagtgcaggaggcggccag
agtctctggaaagctggaccccacgtatgggctggaaagcagctgcattgctgggacggc
cccagaagaaccggaaaagcttgatgggcctgaagaagaaaaaatggaaacggaggcaga
cgggccgccggcagaaaaagtgaaggttgaaaacaaaggggagaatgaaatagatggaaa
caaggtgctggaaggagaagaggagagacatgcagagaaggagcaagacggtgacgtccc
tctggatcctaaaccagatgagagggaagcggaagagaacaaggagaatctcgatgtgtg
caaagacaaggacagcgacgctgggaagaagagggccgagcacgagatctccgaagggaa
cgtcgcgacggccgcagctgctgctctggcctcggctgccaccaaagccaagcatctggc
agccgttgaggagaggaagatcaagtccttggttgccctcttggtggaaacgcagatgaa
gaaactagagatcaaactccgtcattttgaggagctggaaacgatcatggaccgagagaa
agaggcgctggagcagcagaggcagcagctgctgaccgagcgccagaacttccacatgga
gcagctgaagtacgcggagctgcgtgcccgccagcaactggagcagcagcacagtcagaa
cgctcagcagtcccaccagcattccagtggccccggcatgaaccctctggggacaccccc
tgggcactccggcctgatggcgccccagcagccgcctccgtatcccatgatgcaccatca
gatgccccctcctcaccccccacagccaggtcagatcctcggaccaggctccatgattcc
cgggcaacccgtgcccggtggccggatgatgcaggcaggagcagccaacagcggcagtgc
tggcgccccccagcctgccacagcgccagcagcagggagtattgctggacctcggggggc
cctggcgtcgcccaacggcttgtatccaccgccaccgcagccgccggcaccacctccagc
cgacggggtcactccgcctcctgcaggagcgccaccggcctccacagcgccctga
DBGET
integrated database retrieval system
