KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107107867
Entry
107107867         CDS       T04299                                 
Symbol
KDM5B
Name
(RefSeq) lysine demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gja01009]
    107107867 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gja03036]
    107107867 (KDM5B)
Enzymes [BR:gja01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107107867 (KDM5B)
Protein phosphatases and associated proteins [BR:gja01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107107867 (KDM5B)
Chromosome and associated proteins [BR:gja03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107107867 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 107107867
NCBI-ProteinID: XP_015263710
LinkDB
Position
Un
AA seq 1544 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKDRKWTRIATKMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLAPDICSKLMC
LVDDAVLEKCLQKPDLASDTKDKEYKPHDIPQRQSVQPSESCPPARRAKRMKTETTNIKT
DSEETAETKTHNLRRRMGSTPAKPDNDKESHAIVKRETVEKKQTIWETDREKPKGRSKKS
FNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECSK
PQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTV
EYGADIASKEFGSGFPVRGGKIKLRTEEEEYLDSGWNLNNMPVMEQSVLTHITADICGMK
LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFE
SQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFC
TVDWLPLGRQCVEHYRLLNRYCVFSHDEMICRMAAKAETLDVVVASTVEKDMAIMIEDEK
ALREAVCKLGVTDSERMYLEILPDDERQCIKCKTTCYMSAVSCSCNPGLLVCLYHVEDLC
TCASYKYKMGYRYTLDELYPMMNALKLRAESYNEWASNVNEALEAKVNNKKSLMSFKALI
EESEMRKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELR
LFVRQLYALPCVLSQTALLKDLLNRVEEFQKYSQKLLSEEIPSASELQELLDVSFDFDVD
LPQLGDLRVRLEQAHWLEDVQQIFLDQNSLTLDDMRRLIDSGVGLAPHPAVEKSMARLQE
LLTVSEHWDDKARTLIKSRPRQSLSSLEAAVKEIEEIPAYLPNGIALKEAVKKAKDWLQE
VEGLQAGGRVPVLDTLVELVSRSRSIPVHLEYLPRLESLVAEVQAWKEAWKERAANTFLT
ENSPYSLLEVLCPRCDTGTLGFKRKPKKLKEPVPNGKKKSTKLESLNDLERALSDSKETA
AAMATLGEARLKEMEALHSLRAANEEKLFYNPQDVEIKVCLCQREPAAPMIQCELCRGIF
HTSCVSVPSTSQEPQVWLCPHCHRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERT
VNWQHRAQQMLSSGNIKLMQDKAGSGILYSRWQTMAGQLQETSKVSQTIGATSFSLPHDW
NDRPMHLHSPFSTGQNCIPLHTISAELNELMMEAQLLQVSLPEIQELYEILFTKQNPVAK
TEQKSSVGPTSEKNDCCRGKRDISCSMERKLKRRFERGDFCSEMRTRVRKITPNKKKLKL
THLRELSSGKVEPERLFDIQHSSESQLLLSDMSFSEQEESEDEDAICPAVNCLQPEGDEV
DWVQCDGCCNQWFHQVCVGVSPEMAEKEDYICVSCTGKVSPYQK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggccgagttcctgccgccgcccgagtgccccgttttcgagcccagctgggaagagttc
gctgaccccttcgcctttatccacaagatccggcccatagccgagcagactgggatctgc
aaggtgcggccgccgccggactggcagcctccatttgcatgtgatgtggataaacttcac
tttactccacgaatccaaagactgaatgaattggaggctcagacccgggtaaaactgaat
tttttggaccagattgcaaagttctgggaacttcaaggatgtacactgaaaatcccacat
gtagaaagaaagattttggatttgttccagcttaataggctagttgcagaagaaggtgga
tttgatgtggtgtgtaaagacagaaaatggactagaatagctaccaagatggggtttgct
cctggcaaagcagtgggctcacatatccgtgcccactatgagcgcattctttatccttac
aacttgttccagtctggagctagcttactggcacctgacatttgttccaaactgatgtgc
ttagtggatgatgcagttctggaaaagtgtcttcagaagccagatcttgccagtgataca
aaggacaaggaatacaaacctcatgatattcctcaaagacaatctgttcagccttctgaa
agttgtccacctgcacgtcgagcaaagcggatgaaaacagagactactaacattaagact
gattcagaggaaactgcagaaaccaagactcacaacttgagacgccgaatgggaagcacc
cctgcaaagcctgacaatgataaagaatctcatgccatagtgaagcgggaaactgttgag
aaaaaacaaaccatttgggaaactgacagagaaaaaccaaagggacgttctaagaagagc
tttaatgcagtggatttgtatgtatgcctcttatgtggtagtgggaatgatgaggaccgt
ctgctcctgtgtgatggctgtgatgacagttaccataccttttgcttaattccacctctt
catgatgttcccaaaggggactggagatgtccccagtgcctcgctcaggaatgtagtaaa
ccacaagaagcattcggttttgaacaggcagcacgagactacacactccgcacatttgga
gaaatggcagatgcattcaagtcagattactttaacatgccagtgcacatggtgcctaca
gaactggttgagaaagagttttggcgccttgttagcacaattgaagaagatgtcacagtg
gaatatggtgctgatattgcttccaaggagtttggcagtgggtttcctgtgagagggggg
aaaataaaattgagaacagaagaagaggagtatcttgatagtggctggaatttgaacaat
atgcctgtgatggagcagtctgtccttactcacataactgctgatatatgtggaatgaag
ttgccttggctatatgtagggatgtgcttttcttcattttgctggcatattgaagatcac
tggagctattctattaactacctgcattggggggagccaaaaacatggtatggagcccca
ggatatgcagccgagcaattggaagatgtgatgaagaagctggctcctgagctatttgaa
tctcagccagatcttttacaccagctggttacaattatgaatcccaatacactaatgtct
catggcgtgcctatttaccgaaccaaccagtgcgctggtgaatttgtgattacatttcca
agagcttatcacagtggctttaatcagggtttcaattttgctgaagctgttaacttctgc
accgttgactggttgccattgggtcgccagtgcgtggaacactatcgcttgttaaaccgc
tattgtgtattttcccacgatgagatgatatgtagaatggctgccaaggcagagactctt
gatgtggtggtagcttctactgttgagaaagacatggctattatgattgaagatgaaaaa
gctttacgagaggctgtgtgtaagctgggagttactgattcagagagaatgtatttggaa
atattgccagatgatgaacgacagtgcataaagtgtaaaaccacttgctacatgtctgct
gtctcctgttcatgtaatcctggcctgttggtatgcctgtatcatgtggaagacctctgt
acatgtgcctcatataaatataaaatgggatatcggtatacactagatgaactttatcca
atgatgaatgcacttaagttgcgggcagaatcttacaatgaatgggcttctaatgttaat
gaagctctggaggcaaaagttaataataaaaaaagtctcatgagtttcaaggctttaatt
gaagaatcagaaatgaggaagttcccagacaatgatctactacgacacctccgtttagtt
actcaggatgcagaaaaatgtgcatcagttgcacagcaacttcttaatggcaagaggcaa
actaggtatcggtctggaggaggaaaatcccaaaatcagctgactgtgaatgaactccgg
ttgtttgttaggcaactctatgctttgccatgtgtcctcagccaaacagcattgctgaag
gatcttcttaatcgtgtggaagaattccagaagtatagccaaaaacttctatctgaagaa
attcccagtgcttcagaactacaggaacttttggatgtcagttttgactttgacgttgat
cttccccagctcggtgatttgcgagtgcgcctagaacaagcacactggctagaagatgta
cagcaaattttcttggaccaaaattctcttactttggatgatatgagaagactcatagac
tctggtgtaggactagctcctcatcctgcagttgagaagtcaatggctaggctgcaagag
ctcttaacggtatctgaacactgggatgacaaagcacgaactctgataaagtccagacca
cgacagtcattaagcagtcttgaagcagcagtgaaggagatagaggaaattcctgcttat
cttccaaatggtatcgctctgaaagaagctgtaaaaaaggccaaagattggctacaggaa
gtggaaggcctccaggctggtgggcgtgtgcctgtgttagatacactagtggaacttgta
tcgagaagtcgctctattccagtacatctggaatatctgccgaggctagagtccttagtt
gctgaagttcaagcctggaaagaggcctggaaagagcgtgcggcaaatacgtttttgact
gagaactcaccctactctcttctggaggtgctgtgtcccagatgtgatactggaacacta
ggatttaaaagaaaaccgaagaaattaaaagagcctgttccaaatggaaaaaagaagagc
acaaaactggagagtttaaatgacttagaaagagctttatctgacagtaaggaaactgct
gctgcgatggccactcttggtgaagctcgtttgaaggagatggaagcattgcactctctg
agagcagcgaatgaagaaaaactcttctataatcctcaggatgtagagatcaaagtttgc
ctatgccagagagagccagcagcccctatgatacagtgtgaactttgcagagggatcttt
cacaccagctgtgtttcagtgcccagcacttcacaggaacctcaagtgtggctctgtcct
cactgccacagatcagaaaaacctcctttagaaaagattctgcctttactggcctccttg
cagcgtattcgtgtgagactgcctgagggagatgctttacgctatatgatagagagaacc
gtgaactggcaacacagagcacaacaaatgctatcctcagggaatataaaacttatgcaa
gacaaagccggctcagggatactgtacagcagatggcaaaccatggcaggccaattgcaa
gagaccagtaaggtatcacagacaattggcgctacctctttttctttgcctcatgactgg
aatgacagacccatgcatttacactctcctttttctacaggacaaaactgcatccctctt
catactatcagtgcagagctgaatgaattgatgatggaagcccaattgctacaagtttca
ctacctgaaatacaagagctctatgagatcttattcacaaaacagaaccctgttgcaaag
actgaacagaagtcatcagtaggaccaacaagtgaaaagaatgactgttgccgagggaag
agagatataagttgctctatggaaagaaaactaaagaggcgctttgagagaggggatttc
tgcagtgagatgagaacaagagtcagaaaaataactcccaacaagaaaaaattgaaactt
acccatttgagggagctaagcagtggcaaagtggaaccagagaggctgttcgacattcag
cactccagtgaaagccagttgcttctctcggatatgtccttctctgaacaggaagagtct
gaagatgaggatgccatttgtccagctgtcaattgcctgcaacctgaaggtgatgaggtg
gattgggtccaatgtgatggctgttgcaaccagtggttccatcaggtgtgtgtgggtgtt
tctccagagatggcagaaaaagaagactacatttgtgtgagctgtactggaaaggtctct
ccatatcaaaagtaa

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