Gekko japonicus (Schlegel's Japanese gecko): 107108055
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Entry
107108055 CDS
T04299
Symbol
WRN
Name
(RefSeq) Werner syndrome RecQ like helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gja03032
]
107108055 (WRN)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107108055 (WRN)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107108055 (WRN)
DNA replication proteins [BR:
gja03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107108055 (WRN)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107108055 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
107108055
NCBI-ProteinID:
XP_015263924
LinkDB
All DBs
Position
Un
AA seq
1459 aa
AA seq
DB search
MTKESKVDAVDDKKRNPVHRSVLEDNLPFFEFHGSIVYSCNSSDCSLLSEDIIATLPDGA
VLGFDIEWTPSYTKGKEGKVALIQLCESEKKCYLFHISAMSSFPVGLKMLLEDKSVKKAG
VGIEGDKWKLMRDFEIRLDGIVELADLANEKLKCKEIWSLNNLVKHLFHKQLLKDNSIRC
GNWEQFPLTEEQRLYAATDAYAGFLIFQKMANMKSLKQIRLGAEEDGVLVQNDIKKELTS
LSEEIMDLAHHLPNSFEQPINVQRAAEILTSISENIETLRRVLVVESSCQTALRNVAESG
TEGSEEIKTERAGLDSKTVGDFSDSIDHKLSGVQKGTVAEGELNMEKQIDRASSGGPQVA
AERDCLMSLDITECELQMLERLAQEELLNETTCMSEDLSVIEEEENSSFTIESDDELEME
MVKSLEGVDKRPADCTASQLAETRRPSDAVADDEDEGIEEEEESWDSSLPGPNNKQISCL
KTYFGHSSFKPVQWKVISSVLQDRRDNLVVMATGYGKSLCFQFPPVYTGGTGIVISPLIS
LMEDQVLQLEMSGIPACLLGSAQSKNVRKDIKAGCYKVVYMTPEFCLGNLSWLQELERSI
GLTLIAVDEAHCISEWGHDFRNSFRSLGSLKTTLPEVPIMALTATASPSIRDDIVRCLNL
KSPQITCTSFDRPNLYLEVGRKTGSIIQDLQQFLIKKEKSAYEFEGPTIIYCPSRKITEQ
VAAELSKLNLPCRTYHAGMGIKARRDVHHSFMRDEIQCVVATVAFGMGINKPDIRKVIHY
GAPKEMESYYQEIGRAGRDGLPASCSVLWTSADMALNRHLLSEICNERFRMYKFKMMAKV
NTYLSSISCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCRSRNICCTYGVDTEVSLQDF
GQQAYLLMSAICALNEKFGMGVPILFLRGSNSQRLPDRYRTNPLFGSGKDWPENLWKALG
RQLILEGFLKEVSGHSKFSTTCKLTQTGNNWFCKARSESERKLLLQPDEELYVKKPSVSS
KQTPLPAGHFSDVSKLMPEKQTSLHEMFSYREASKVSRGSALPNTSAPVQSPAKLPPVPW
TPTEPVISPREKELQTVLYGKLVAARQKLASEKDIPPAILATNKVLVDLTLIRPTTLENV
KRVDGISEAKSTMLVPLLSTIREFCQANNLQSDVFKSYGSRAQPQIVLQPEGGRGTLTQS
EHITYMLFQQKDMTLKRISETRSLPLTVVGTHLSQALKAGYPVDVECAGLTPEIQELITK
VIQSPPINSDVTRMKDIRALVPAKIDLYLIRMTIVLLESQLLVPQTDSEKQKLPQESRWL
QSRTGSVQKNEEKIVWIEAKGESVKPAVYKPSSASRESIKQDLSSLDSPSWAKSSSEEPF
PNVIKQEVQSHQSSIKLASWNQPPLNPEEEDLFTDSQSQILSQPSKRKLPEWFGTSQGPA
PHVRTSKKSKGGGSKGLFG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagagagcaaagtggatgcagtggatgacaaaaagaggaatccagtccatcgg
agtgtcctggaagacaaccttcctttctttgaattccatggttccattgtctacagttgt
aattccagtgattgctctttactttctgaagatattattgcaaccttgcctgatggagcc
gtcctgggatttgacattgaatggacaccgtcctacaccaaagggaaggaagggaaagtt
gctttaatccagctgtgcgagtctgagaaaaaatgttacctgtttcacatctcagccatg
tcaagcttccccgtgggactaaaaatgctgcttgaagataaaagtgttaaaaaagctggt
gtcggtattgaaggagataaatggaagctgatgcgtgattttgaaatccgattggacggc
attgtcgagttggctgaccttgccaatgaaaagctaaaatgcaaggagatctggagcctg
aacaacctcgtaaaacatctgttccacaaacagcttctgaaagacaattcgatccgttgt
ggtaattgggaacaatttccgctaacagaggagcagaggctgtatgcagctacggatgct
tatgctggcttcctcatctttcaaaagatggcaaatatgaaaagtcttaagcagatacgg
cttggtgctgaagaagatggtgtacttgtacagaatgacataaagaaggaattaacctct
ttatcagaagagattatggatttggctcatcaccttccgaactcttttgaacaacccata
aatgtgcaaagagcggcagaaatattaaccagtatttcagaaaacatcgagaccttgaga
agagtgttggttgttgagtccagttgccagacagcactgagaaatgttgcagaatcagga
actgaaggtagtgaagaaataaaaacagaaagagctggattggattccaagaccgtaggt
gatttcagtgactccatagatcataaattatcgggtgtccaaaaaggaaccgtggcagaa
ggagaacttaacatggagaaacaaatagatcgcgcttcaagcggaggccctcaagtagct
gcagaaagagactgcttgatgtcgctggacatcactgagtgcgaacttcagatgttggag
cgtctggcccaggaagagctgctgaatgaaacaacttgtatgtcggaggatttaagcgtc
atagaggaggaagagaattcttctttcaccattgaaagtgatgacgaattggagatggag
atggttaaatctttagaaggtgtagataagcgccctgcagattgtacggcctcccagctg
gctgaaacaaggagaccaagtgatgctgttgcagatgatgaagatgaaggcattgaggag
gaagaggaaagctgggattcctccttacctggaccaaataataagcaaatcagctgccta
aagacctattttggacattcaagttttaaaccggtccagtggaaagtgatctcttcggtt
ttgcaagacagaagagataacctcgttgttatggcaactgggtatggcaagagtttgtgc
tttcagtttccacctgtatacaccggaggtactggaatagtcatctctccccttatttct
ttaatggaggaccaggtactccaactcgagatgtcaggaattccagcttgccttcttggg
tcagcacagtcaaaaaacgtccgaaaggatatcaaagcgggctgctataaagttgtctac
atgactccagagttctgtttggggaacttgtcgtggcttcaggaactcgagcggtcgatt
ggtttgacgctgatagctgttgatgaagcgcactgcatttctgaatggggacacgacttc
aggaactctttcaggtctttggggtcattaaagacaactcttcctgaggttcctattatg
gctctcactgcaacagcaagcccttccattagagatgacattgtgcgttgtctaaactta
aaatctcctcagataacatgcactagcttcgatcggccgaacctgtacttagaagttgga
cgaaaaacggggagtattatccaagatctgcagcagttccttattaaaaaagaaaaatct
gcttatgagtttgaaggtcccactattatttactgcccttcaaggaagataactgaacag
gtagctgcagagctgtcgaaactgaatcttccgtgccgtacataccacgccggcatggga
atcaaagcgaggcgagatgtccaccatagtttcatgagagacgaaattcagtgcgttgta
gctactgtagcctttggaatgggcatcaataagccagacatccggaaggttattcattat
ggtgccccaaaggagatggaatcgtactaccaggaaatcggaagggctggtcgtgatggg
cttccggcctcttgctctgtgttgtggacctctgctgatatggctctgaacagacaccta
ctcagtgagatatgcaacgaaagatttcgcatgtacaaattcaagatgatggccaaggtc
aatacctatcttagttcgatcagctgccggcggaaaatcatcttgtctcattttgaagac
aaacaactccgaaaggcatcgtctggcatcatgggaacagaaaaatgttgcgataattgc
agatccaggaacatttgctgtacttatggggttgacacagaagtcagtttgcaagatttt
ggtcagcaggcttacctgttgatgtctgcaatatgtgccttaaatgagaaatttggcatg
ggcgttccaatcctgtttctcagaggatctaattctcaacgtctgccagacagataccga
accaatcctctttttggcagcgggaaggactggccagagaacttgtggaaggcactcggt
cggcagcttattctggaaggctttcttaaagaagtttctgggcatagcaaattttccacc
acgtgcaagctgactcagacggggaacaactggttttgcaaagctagaagcgaatcggag
cgaaagctgctgcttcaacctgacgaggaactttatgtaaagaaacctagtgtcagctct
aaacaaacacctttgcctgcaggacatttctccgatgtgtctaagctgatgccagaaaag
cagacatctttgcacgaaatgttctcctatcgagaagcaagtaaagtctctagagggagt
gcgcttccaaatacaagtgccccagtgcagtcaccggctaaactgcctcctgtgccctgg
acccctacagaacctgttatatctccaagggagaaggaattacagacggttctctatggc
aagttagtggcagccaggcaaaaactagccagtgagaaggacatccctcctgccatttta
gcaaccaacaaagtgctggtagatttgaccctgataaggcctacaactttagaaaatgtg
aagagagttgatggcatttctgaagccaaatccaccatgttggttccgctcctgagcaca
atcagggagttctgtcaagccaataatctccagtcggacgtcttcaagtcttatggatcc
agggcccaaccacaaattgtccttcagccggaaggtggacgcggcactttaacacaatca
gagcacataacgtatatgctttttcagcaaaaggatatgacattgaagcgtataagtgag
acgcggtctttacctcttacggtggttggcactcatttatcccaagctctgaaagctggc
tacccagttgacgtagaatgtgcaggtctgactcctgagatacaagagctgatcaccaaa
gtcatccagagccctcccatcaattcagatgtaacaagaatgaaagacattagagcttta
gtgcctgcaaagattgacctgtatctcataaggatgaccattgtacttctggagagtcag
ttgctggtaccccagacagactcagagaaacaaaagctacctcaagaatcacgatggctg
cagtcaaggacgggatcggtgcagaagaatgaagagaagattgtgtggattgaagccaag
ggagaatctgttaagccagctgtctacaaacctagttctgcgtcccgtgaaagtataaag
caagatctctcatctttagattctccatcttgggcaaagagcagcagcgaagagccattc
cctaacgtcatcaagcaggaggtccagagccatcagagctctatcaaattagcatcatgg
aatcagcctccactcaaccctgaggaggaagacctctttacagattcccagtcacagatc
ttaagtcagccttcaaaaaggaagttaccagaatggtttggaacttcacagggacctgct
cctcatgttaggacttctaaaaaatcaaagggaggaggaagcaaaggtctttttggctga
DBGET
integrated database retrieval system
