Gekko japonicus (Schlegel's Japanese gecko): 107108303
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Entry
107108303 CDS
T04299
Symbol
RC3H1
Name
(RefSeq) ring finger and CCCH-type domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107108303 (RC3H1)
04121 Ubiquitin system [BR:
gja04121
]
107108303 (RC3H1)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107108303 (RC3H1)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107108303 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107108303
NCBI-ProteinID:
XP_015264209
UniProt:
A0ABM1JRX2
LinkDB
All DBs
Position
Un
AA seq
1136 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVPLCSGAENTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLSSAAILSDE
GAVDLPSRKPSALPNGIVSAGSAVTQLISRGTDSSYDSALKPGKIDHLSSSAPGSPPDLL
ESVPKSSLSALPVNSHPVPPRGPADLAQISVGKQLQMVPRGSPLYPAQQADVFYPDPRGA
APPFEPPPYQPGVYYPTAQSSQCMSRFVRPPPSVPEPGPPYLEHCSPYFQDRVVNSQYGA
QPQQYPPMGQPMYPPHYDSRRVYPSAQPYPREEIIRGSPVPIEIPPPAVSPYVPETRDRY
PQVEGYYPVSPHLSQIRPSYPREPYGRPPPQPHPSLDELHRRRKEIMAQLEERKVISPPP
FAPSPTLPPSFHTDEYMDEDLKLAGKYKGNDYSQYSPWSCDTIGSYIGTKDVKPKDIVAA
GTVEMVNVDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKTMYQNPGP
MQAMTVQGASTKPVNISDYSPYGTHSAWGGSPYAPHPNLPSQGRLSDRERLSITDAAGHG
KPLPSAEREQQLRLELQQLNHQISQQTQLRGLEAVSNRLLLQREATTLAGQPQPPPPPPK
WPGMISSEQLSLELHQVEREIGKRTRELSMESQSSLEVKSKLGASKQTENGQPGKVPAED
LALAFSSDVPNGSAPTQENVGLLSNKTAALSLSEDTEGGGGEQDTQRAGTTSTSAP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgccctatttgcacacaaacc
ttcgacgaaacgatccggaagcccatcagcctgggctgtggccacacagtctgcaagatg
tgcctgaacaagctccaccggaaggcatgcccctttgaccagaccactattaacacagac
atcgagcttcttcccgtgaactctgctttgttgcagcttgtgggggctcaggtgccagaa
cagcagccagtacctctgtgcagcggtgctgagaataccaagcattatgaggaggccaag
aaatgtgtggaagaactagccttgtaccttaaaccactcagcagtgctaggggtgttggg
ctgaacagcaccacccagagtgtactcagtcgccctatgcagcggaagctggtgacctta
gtccactgccagctggtggaggaagaagggcggatcagggcgatgcgagccgcgcggtcg
ctaggagaaaggacggtcacagagctcatcctccagcaccagaacccccagcaactctcc
tccaacctttgggctgcagtgagggccagaggctgtcagttccttggaccagccatgcaa
gaggaagctctcaagttggttcttttggctttggaggacggatctgctttgtcacggaag
gtcttggttctcttcgtggtacagaggttggagccgcgatttcctcaggcttcgaaaacc
agcattgggcatgttgtccagctcctttacagggcctcttgtttcaaggtaactaaacgc
gatgaagactcctccctgatgcagctgaaggaggagttccgaacgtatgaagctctgagg
cgggagcacgattcccagattgtgcaaattgcgatggaggctggtttgcgcatcgcccca
gatcagtggtcctcgttgctatatggtgaccagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcctttgcacagagtgttcaggagctaacaattgct
ctccagcggactggagaccccgccaatctgaataggcttcgacctcatcttgaactccta
gcaaatattgatcccagtccagacgccccgccacccacgtgggaacagcttgagaacggg
ctggttgctgtgcggactgtggtacacggcctggttgattacatccagaatcacagcaag
aaaggagcagatcaacagcagcctccgcagcacagcaagtacaagacatacatgtgccgt
gatatgaagcaaagaggagggtgcccccgtggggccagctgtacctttgcacattcgcag
gaagagttagaaaaatttcgtaagatgaacaaacgtctggttcctcgaagacccctgagt
gcctccttaggccaactgaatgaagtgggcttatcttcagcagctatcctgtcagacgaa
ggggcagtggacctgcccagcagaaaaccctctgccttgccaaatgggattgtttcagcc
ggcagtgcagtgacacagcttatctctcgtggaactgactccagctacgattcagcactg
aagcctgggaagatcgaccaccttagcagcagtgcccctgggtcacctcctgacttgctg
gaatctgttcccaagagctctctgtctgccttaccagtgaactctcatcccgtgccaccc
cggggaccggcagacctggctcagatatccgtcggcaagcagctccagatggtaccacga
ggctccccgttatatcctgctcagcaagccgatgtgttttacccagatcctcggggagca
gccccaccatttgaacccccaccctaccaaccaggtgtgtattatcctacagctcagtct
tcacagtgtatgtctcgatttgtccgacctccaccatccgttcctgagccaggtcctccg
tatttagaacattgctcaccatacttccaagaccgcgtggtgaattctcagtatggcgca
caaccacagcaataccctcctatgggacagcccatgtaccctccccactacgacagccgc
cgtgtgtatccctctgctcagccatacccccgggaagagatcatcagaggaagccctgtg
cccattgaaattcctccaccagctgtatcgccatatgtacctgaaacaagagacagatat
ccacaagtggaaggctactatccagtcagtccgcatctcagccagatccgaccttcgtat
cccagagagccttatggccggcctccacctcagccacaccccagcctagatgaactgcac
cgtcgtcggaaagagatcatggctcagctagaggaaaggaaagtcatctcccctcctcct
tttgcaccgtcaccaactctgcctccctctttccacactgatgagtacatggatgaagac
ctgaagttagctggcaaatacaaaggaaatgattacagccagtattctccttggtcatgt
gacaccatcggctcctacatcggaaccaaagatgtaaaacccaaagacattgtggcagca
gggactgtggagatggtgaacgtggatagcaaagggatgcgagaccagcggttggatttg
cagaggagagcagcagagactggcgacgacgatctcattccatttggagaccggcccacc
gtctcaaggtttggtgcaatctcacgtacgtctaaaactatgtaccagaatcccgggccc
atgcaagccatgacagttcaaggagcttccacaaaaccagtcaacatttcagattacagc
ccttatggaacacacagcgcatggggaggctcaccatatgcaccccacccaaacctacct
tctcagggacgccttagtgacagggaaagattgtccataacagatgcagctggccatggg
aagcctttgccctcggccgagagggagcagcagcttcggcttgaactgcaacagctaaac
catcagatcagccaacagacacaacttcgaggactggaggctgttagtaacaggctgctg
ttgcagagggaggcgaccaccttggcaggccaaccacagcccccaccgccacctcccaag
tggcctggaatgatctcgagtgaacagctgagcttggagctacaccaggtggagagggag
atcgggaagagaacccgggagctgagcatggagagccagtcttccctggaagtgaaaagc
aaactgggtgccagtaagcaaacagaaaacgggcaaccaggcaaggtgccagctgaggac
cttgcgctggcattcagcagtgatgttccgaatggatcagccccaacccaagaaaatgtc
ggcctcctctcaaacaaaactgcagctctgagcttgtcagaggacaccgaagggggagga
ggtgagcaggacacccagagggcagggacaacatccacatctgctccctga
DBGET
integrated database retrieval system
