Gekko japonicus (Schlegel's Japanese gecko): 107108756
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Entry
107108756 CDS
T04299
Symbol
RAD50
Name
(RefSeq) RAD50 double strand break repair protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03440
Homologous recombination
gja03450
Non-homologous end-joining
gja04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107108756 (RAD50)
03450 Non-homologous end-joining
107108756 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
107108756 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gja03032
]
107108756 (RAD50)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107108756 (RAD50)
DNA replication proteins [BR:
gja03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107108756 (RAD50)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107108756 (RAD50)
BRCA1-C complex
107108756 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
107108756 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ATG17_like
AAA_29
TolA_bind_tri
UPF0231
AAA_24
Motif
Other DBs
NCBI-GeneID:
107108756
NCBI-ProteinID:
XP_015264759
LinkDB
All DBs
Position
Un
AA seq
1312 aa
AA seq
DB search
MSRIDKMSILGVRSFGVEDKDKQVITFLNPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TQGKSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKHGQQVKVCQETLKFLKQNKEKAQEIQSQLNSREAQLAASREN
VRSIENQLEPLKDRLAEIEHSLIKVMRLDNEIKALESRKKQMEKDNQDLQQKMEKVFQGT
DERLRDMYQNHQKTVREKEKRLTECQRELERANKECQRFNREKSELLIEQGRLQLQADRH
QQHIRTRDSLIQSLAVHMELEGFERAPFNERQINSFHRLVKERQDKDTEAANQLMREFGE
KEMMKQKQLDEIRDKKTGLERTIELKVDIQNKKQLEVKNLKHELHQLEGSSDRLSELDQE
LAKAKRELEEAERNSNVEGLEMEIKELQREKANLDSILRKLDKEMEQLNLNTAIITQMDM
LKKDKADKEEQIRKIKSRHSEELISLLGYFPNKRQLEDWLHSKVREINQTRDKLAKLNKE
LVSAEQNKSHISAEIRKKEEQLTSYEEKLFDVCGSQDFESDLQKLDDEIEKTSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTEFELK
RRERRRDEMIGLKPVRQTVEDLKEKDIPDLRNRLQTLNRDIQRLKGDLEEQETLLGTFMP
EEESAKACLQDITLMERYQTDLKDVERKIAQQATKLQGVDLCRTLLQVSQEKQEKKHQLD
TVTGKIELKQNLKQDQQNQVQHLKSTVNELKAEKLQISSCMQRRQQLEEQTVELTTEIHS
LNREIKEAKEQIFPLGATLEKLQEEKEELMNKKNTSCKIMQEKINDVKEKVKNIHIYVKE
IENYIQEGKEEYKQQKESELDEVKEQLAECEKKKEKINKEMGTIRQDIDTQKIQERWLED
NLTLRKRNEDLKEVEDNIKQYLKEMGELQVPQLKKDRQHLEEKIDDLKRNHSLALGRQHG
FEEEILRFKKELRDPQFKDAEEEYRKKMIVMRTTELANKDLDIYYKALDHAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENASASVKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAESFCLNCGILALDEPTTNLDRENIESLAHALVEIIKNRSQQH
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNLDQCSEIVKCSVTSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggattgataaaatgagcatccttggtgtgaggagctttggggtagaggacaaa
gataagcaagtaatcactttcttgaaccctttaactatcttggtggggccaaatggcgct
ggaaaaacgactatcatagaatgcctcaagtatatttgcactggggatttcccacctggc
acccaaggaaaatcatttgttcatgatcctaaggttgctaatgaaacagatgtgagggct
caaattcgacttcagtttcgtgatgttaatggagagcttgtagctgtccagcgatccatg
gtatgcactcagaaagggaagaaaacagaatttaaaactcttgaaggagtcataacaaga
acaaagcatggggagaaggtcagtctgagctccaaatgtgcagaaattgaccgagagatg
atcagcgcccttggtgtttccaagtctgtgattaataatgttattttctgccatcaagaa
gaatccaactggccattaagtgaaggaaaggccctgaaacaaaaatttgatgaaatcttt
tcagcaacaaggtacattaaggcattggaaactcttcgtcaagttcgtttgaagcatggt
caacaggttaaagtgtgtcaagagacactgaagtttctgaaacagaataaagaaaaggcg
caagagattcagagtcagcttaatagtagggaagctcagctggcagcttcaagggaaaat
gttagatctattgagaaccagcttgaaccattaaaggatcgtctcgcagaaatagaacat
agtctcataaaagtaatgagacttgataatgaaattaaagctctggaaagccggaaaaaa
cagatggaaaaggataaccaagatttgcaacaaaagatggagaaggtttttcaagggact
gatgaacggcttagagatatgtatcaaaaccaccagaaaactgtcagagaaaaggagaag
agactaacagaatgtcagagagaactggagagggcaaataaggaatgccaaaggttcaac
agagaaaaatcagaactcttgattgagcaaggtcgtcttcagctgcaagcagatcgtcac
cagcagcacattagaaccagagattcattaattcagtctttggctgttcacatggaattg
gaaggatttgaaagagcacctttcaatgaaaggcaaattaacagttttcacaggcttgta
aaggagagacaggacaaagacactgaagcagctaatcagctgatgagagaatttggagag
aaggaaatgatgaagcaaaagcaattagatgaaataagggataaaaaaactgggcttgaa
agaactattgagctgaaggtagacattcaaaataaaaagcagcttgaagtgaagaacttg
aaacatgaactgcaccagcttgaagggtcatcagacaggctttcggagctggatcaggaa
cttgccaaagcgaaacgtgaactagaagaagctgaaaggaatagcaatgtagaaggcctg
gaaatggaaataaaagagttacaaagagagaaggcaaatttagacagcattcttcggaaa
ctggataaagagatggagcagttgaacttgaatactgcgataataacccagatggacatg
ctgaagaaagataaagctgacaaggaggagcagattagaaaaatcaaatcaagacatagt
gaagaattaatctccttactgggatattttccaaataaaagacagcttgaagactggctt
cattctaaagtgagggagattaatcagacaagagacaaacttgctaagcttaacaaagaa
cttgtttcagctgagcagaacaaaagtcatattagtgctgaaatacgaaaaaaagaggag
cagttgaccagctatgaagaaaagctctttgatgtttgtggaagccaggattttgaaagt
gatctacagaaacttgatgatgaaattgaaaaaacatccaagcaacgagctatgcttgca
ggagctacagcagtttattcgcagttcattacacagttaactgatgagaatcagtcatgt
tgtccagtctgtcagagggtctttcagacagaggcagaactgcaggacgtgataagtgac
cttcaatccaagctgcgccttgccccagacaagttgaagtccacagagtttgagctgaag
aggagagagagaagacgtgatgaaatgattgggcttaaaccggtcaggcaaactgtagaa
gatctcaaagaaaaggatataccggatttaaggaacagactgcagactctcaacagagat
attcaacgccttaaaggtgatctcgaagaacaggaaaccctcttgggtacttttatgcct
gaagaagaaagtgccaaagcatgtctccaagatattacacttatggaaaggtaccagaca
gatctaaaggatgttgaacggaaaattgctcagcaagctactaagttacagggagtggat
ttatgtcgaactttattacaagtaagccaagaaaagcaagagaaaaagcaccagttggat
acggttactggcaaaattgaactgaagcaaaatcttaagcaagaccaacaaaatcaggtc
cagcatctaaagagtacagtgaatgagcttaaagcagagaaacttcagatttccagttgc
atgcaacgccgacaacagctggaggagcagactgtggagttgaccaccgagattcactct
ttgaaccgagagatcaaagaagcaaaggagcagatatttcctttgggagcaactttagaa
aaattacaagaagaaaaagaagagttaatgaacaaaaagaacacaagttgcaaaataatg
caggagaagataaatgatgttaaagaaaaagttaaaaatattcatatctacgtaaaagag
attgagaattacattcaggaagggaaagaagaatacaaacagcaaaaggaatctgaactt
gatgaagtcaaagagcagctagccgaatgtgagaaaaagaaagagaagataaacaaagaa
atgggaactattaggcaagatattgatactcagaagatccaggagcggtggttagaagat
aatcttacgttaagaaaaagaaatgaagatctaaaagaagttgaagataacataaagcag
tatttgaaagagatgggagaattgcaagtcccacaactgaaaaaggaccgacagcattta
gaggagaaaatagatgatttgaaaagaaatcacagcttagcgctgggtcgacagcatgga
ttcgaggaagagatccttaggtttaagaaagaactgagagatccacagtttaaggatgca
gaggaagagtacaggaaaaagatgattgttatgagaacaacagagctggcaaacaaggat
cttgacatttactacaaagcgctggatcatgcaataatgacatttcacagcatgaaaatg
gaagaaatcaacaagataattcgtgatctttggcgaagcacctacagagggcaagacatt
gaatacatagaaattcggtctgatgcagatgagaatgcatctgcttcagtgaagagaagg
agttacaattacagagtggtgatgataaaaggggacacggctctagatatgaggggcaga
tgtagtgcaggccaaaaggttctcgcttccctcattattcgtctggctctagcagaatcc
ttttgtctcaactgtggaattcttgcactggatgagcccaccaccaacctcgatcgagag
aatattgaatctcttgcacatgccttggttgagataattaagaatagatcccaacagcat
aactttcaacttcttgtgataacacatgatgaagattttgtggaacttttgggtcgttcg
gagtatgtggagaaattttacagaattaagaaaaaccttgatcagtgttcagagattgtg
aaatgtagcgtcacttccttagggtcatatgttcattag
DBGET
integrated database retrieval system
