Gekko japonicus (Schlegel's Japanese gecko): 107108916
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Entry
107108916 CDS
T04299
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107108916 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107108916 (EXOSC10)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107108916 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
107108916
NCBI-ProteinID:
XP_015264948
LinkDB
All DBs
Position
Un
AA seq
898 aa
AA seq
DB search
MAAKVRGGDLAKASQSAETGGDTAEEILPGFRDADTFVKHALGTVVAATKASGGLPQPGD
EFDFYRSFPGFQAYCETQGDRLLNCMSRVMQYHGCRSHLRDRSKAMELEDKFDLLVDAND
AILEREGILLDEAAGMSKNQQPILPSGLQPPKTIISSWNRKQSGESKKWNKSETFRLLHA
KNIARPQFKFREKVDNSNTPFVPKLFVKPNALKPLPEALSRSQRERKERPEDLDVPAALA
DFLHQQRTQQTEQDMLAHPYQYELEHFSPAADLLEKPQVQVLQPVSETPCHFVSTLDQLV
ELNEKLLCCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDLYILNETFTD
PAIVKVLHGADSDVDWLQRDFGLYLVNMFDTHQAARLLNLGKHSLDHLLKVYCDVDANKQ
YQLADWRIRPLPEAMVQYARDDTHYLLYIYDRMKEDLWEKGNGQPALLQSVWQRSKAICL
KKYLKPLFTDESYRELYRKQKKLLNSQQLTAFRLLFAWRDKMARQEDESTGYVLPNHMLL
KISEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVSVGVKKKGPLPN
PEKPENRLFGPHDSSHVPQEEKQNQSEPEPGLALEHSSLFSKAKEEADGMEELPISLCLL
LSASISIFNEPEAGEKKDENLTVAQQKARRIMESFENPFRMYLPAEQNPAHVSQAAKFDP
SSKIYEISNRWKLLSQAQLQAAAKKEPTKKSQQKSQQQQQAATREAAEKECREKAANTAS
VRQLATQEQASKKRERVASEPGTETPKQEKKKAKAAQKPEVQEAPKPFTPFDYSKSDLKV
FAGAGKSKASSQFDPARQAQANKKFSGAGKASQPAGTKSMSYLPAKSSRGFRHNWPKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggtgcgcggcggggacttagccaaagcctctcaatcggccgagacgggc
ggcgacaccgcggaggagattctgcccgggtttcgggacgcggatactttcgtcaagcat
gctctcggcacagtggtggccgccaccaaggcgtccggtggccttcctcagcctggagac
gagttcgacttctaccgcagcttcccgggcttccaggcctactgcgaaacacaaggagac
cgcttgctgaactgcatgagccgagtgatgcagtaccatggctgccgcagccacctgaga
gaccgcagcaaagccatggagctggaggacaaattcgatttgctggtggatgccaacgac
gccatcctggaaagagagggcatcctattggatgaggcagcgggcatgagcaagaaccag
cagcctatcctcccctcgggcctgcagccgcccaagaccatcatctccagctggaaccgt
aagcagagtggggagtccaaaaagtggaacaagtcggaaaccttccgcttgctccacgcc
aagaacatcgctcggccacagttcaagttccgcgagaaggttgacaactccaacaccccc
ttcgttcccaagctctttgtcaaacccaacgctctgaagccactgccggaagcactctcg
agaagccaacgtgagcgaaaggagcgccccgaggacttggacgtgccggctgccctggcc
gacttcctccatcagcagaggactcagcagacagagcaagacatgctcgctcacccgtac
cagtacgaactggagcatttctccccagcagctgatcttctcgagaaaccgcaagtccag
gtgctccagcctgtctcggaaaccccatgccacttcgtctccaccttggaccagctggtg
gagttgaacgagaagctcctgtgctgtaaagaatttgccctggacttggagcaccattcc
taccggagctttctgggcttgacgtgcctgatgcaaatctccacccggacggaagatttc
atcatcgacaccctggagctgcgcagcgacttgtacatcttgaacgaaaccttcacagac
ccggcaattgtcaaggtcttgcacggggccgactccgacgtggactggctccagcgggac
ttcggcctctacctggtgaacatgttcgacacccaccaggcggcccggctcctcaacctg
ggcaagcactcgctggaccacctgctcaaggtctactgcgacgtggatgcgaacaagcag
taccagctggctgactggcggatccgtcccctgccggaggcgatggtccagtacgcacgc
gacgacactcactacctgctctacatctatgaccgaatgaaggaggacctctgggagaag
gggaacgggcagccagctcttctgcagtccgtgtggcagcggagcaaggccatctgcttg
aagaaatacttgaagcccctcttcaccgatgagtcgtaccgcgagctctaccgcaagcag
aagaaactcctcaacagccagcagctgacggctttccggctcctctttgcctggcgagat
aagatggcgcgccaagaggatgagagcactgggtacgtgctaccaaaccacatgctgctg
aagatctccgaggagctgcccaaggagccccagggcatcatcgcctgctgcaacccggtc
ccaccgctcgtccgccagcagatcaacgaaatgcacctcttaatccagcaggcccgagag
atgcccctgcttaagtctgaagtttcggttggagtgaaaaagaaaggacctcttcccaac
ccagagaaaccggagaaccgcttgttcggcccacacgacagctcgcacgttcctcaggaa
gagaagcagaaccagtcggaacctgagcccggactggccctggagcacagcagtctcttc
tccaaagcaaaagaggaagcggacgggatggaagagttgccgatttcgctgtgcctcctt
ttgagcgccagcatcagtattttcaatgagcctgaagccggcgagaagaaggatgagaac
ttaaccgtggcccagcagaaagcccgacgcatcatggagtccttcgaaaatccctttcga
atgtatctgccagcggagcagaacccggctcacgtctcccaggcggcaaagtttgatccc
tcctcaaaaatctacgagattagtaatcggtggaagctgttgagccaggcccagctgcaa
gcggcagccaagaaggagcctaccaagaaatcacagcagaaatcacagcagcagcagcaa
gcagcaacacgggaggctgccgagaaggagtgcagagaaaaagccgccaacacggcctcc
gtgcgccagctcgccacgcaagaacaggccagcaaaaagagggagcgagtggccagcgag
ccaggcacagagacacccaagcaagagaagaagaaggccaaagccgcccagaagccagag
gtgcaagaggctcccaaacccttcaccccctttgactacagcaagtccgacctcaaagtc
tttgcaggggccggtaagtccaaggcctcgtcgcagttcgatcccgccaggcaggcccag
gccaacaagaaattttcaggagctggcaaagcttcacaaccagctggaaccaaaagcatg
tcctacctgcctgcgaaatccagccggggcttcaggcacaactggccgaaaagataa
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