Gekko japonicus (Schlegel's Japanese gecko): 107109043
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Entry
107109043 CDS
T04299
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM-type containing 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107109043 (ZSWIM8)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107109043 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
107109043
NCBI-ProteinID:
XP_015265102
LinkDB
All DBs
Position
Un
AA seq
1682 aa
AA seq
DB search
FHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTCGAGAKWCAHVVALCLFRIHNASA
VCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAP
DPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWA
CLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLEILTDQCLTYEQITGWWYSVRTSA
SHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLAVLDPTISPHRRRDMCAQLRLWQL
KVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAYPIPGITYSSADKKNSFCWVKAIQ
QRSCRAQCAEAFCEAGRVPGQEAVGTCLQLGDRSRPASQEPAVRPKEIIGKRKVVPEGPQ
RVLRRLSADGDKAAHKPAANKGKVPAGKSLAGKHSGKRRMSSEDSSLEPDLAEMTLDDSS
LALGAEASNTFSFTESPLGRGYRDTFEDEGGVYFSEAADPTLRSSPSAKKTPKDPVGELG
GRDDDFPCPDESGGGGGGGGVSLKPKEVGENGAAGGEEDDDDYQVYYLNPQEVAKEEEEK
AEGGTEEEQDVFAGIKPLEQESRMEILFACAEALYAHGYSNEACRLTVELAKDLLANPPD
LKVEQPLTKGKKNKVSTSKQTWIATNTLSKAAVLLTVLSERQEYHTLAFQIGMFALELQR
PPASTKALEVKLAYQESEIVALLKKIPLGTNEMNTIRGRAEELREGTLCDYRPVLPLMLA
SFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEG
TRREKGELAGVLMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSSKPAVANQKSP
SKHASQSAAPIQHLPGTPVAQQAGVAPAVQSSPSEAFLEKSTQETPQRSPCDPPAESSVL
KQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLR
GGWAATSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRPESHAP
HVPNQPSEAAAHFYFELAKSVLVKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLY
ALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRAS
RARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGGG
VYPEVLFEVAHQWYWLYEQTVGGTLAQREGATGCSVSGARAPCEAVRGLADNRVTSEPTT
VTVAAAVTAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGLHPYTTLQTHIPCSPQYIG
HPIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVATPSLAATAVSFPGVPVPSMTQIA
VHPYHAETGLSLSSNVAIGSVHAASTFPAIQGTSLTSLSSQPTPLIAGGFPSEEEQHSQP
VSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGVNYV
HQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTPAFHQLVQRCQQAYIQYIHHR
LIHLTPADYDDFVSAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKDLWQRVSLEMTTF
SP
NT seq
5051 nt
NT seq
+upstream
nt +downstream
nt
gtttccacctgagtgccacagtggtgcctccccagatggtccccccgaaaggagcgtaca
acgtggcggtgatgtttgacagatgcagaatcacatcctgcagttgcacctgtggagccg
gggccaagtggtgtgctcacgtggtcgccctctgtctcttccggatacacaatgcatctg
ccgtgtgcttgcgagcccctgtctcagaatccttgtctcgactgcagagagatcagctgc
agaaatttgcccagtacttaatcagcgaactcccccaacagatccttcctactgctcagc
gcctgctggatgagctgctgtcctctcagtcgacggccatcaacactgtgtgtggggccc
cagatcccaccgctggcccctcggcctcagatcaaagcacctggtacttggatgaatcga
cgttaagcgacaacataaagaagaccctgcacaagttctgtggcccttcccctgttgtct
tcagcgatgtgaactccatgtacctctcctccacggaaccccccgcggctgcagagtggg
cttgcctcttgcgccccctgcgagggagggaaccggagggcatttggaacttgctctcta
ttgtccgggagatgttcaagagacgggataccaacgcagccccgcttttggaaatcctga
cagaccagtgcttgacgtatgaacagataactggatggtggtacagcgtcaggacatctg
cgtcccacagcagtgccagtgggcacaccggccgaagcaacggccagtcagaagtggctg
ctcacgcctgcgcaagcatgtgcgacgagatggtggttctctggaggctggctgtcttgg
atccaaccatcagtcctcacagacgaagggacatgtgcgcgcagctccggctgtggcagc
tgaaggtcatcgacaacgtcaaaagggggcagcacaagaaatccctggagaagctgttcc
aaggcttcaagccggcggtggaggcctgctacttcaactgggaggaggcctatcccatcc
ctggcatcacgtacagcagcgccgacaaaaagaactctttttgttgggtgaaagccatcc
agcagcggagctgtcgggcccagtgtgcagaggccttctgtgaggcagggagagtgcccg
ggcaggaggccgtggggacctgcttgcagttaggggacaggtcccgccctgcttcccagg
agccagcagtgcgcccgaaagagatcatcgggaagcggaaggttgtccccgaaggccccc
agcgtgtcctgaggcggctttcggccgacggcgacaaggctgcccacaagccagctgcga
acaagggcaaggtcccggcggggaagagtttggccggcaagcacagcgggaagcgccgca
tgagcagcgaggacagctccttggagccggacctggccgagatgactttggacgacagca
gcctggcccttggggccgaggccagcaacacgttcagcttcacggagagtcccttgggcc
ggggctaccgggacaccttcgaggacgaggggggagtgtatttctcggaagcggctgacc
cgaccctccggagcagtccgtccgccaagaagacccccaaggaccccgtgggggagctgg
gcggcagagacgacgacttcccttgcccagacgagagtggtggtggtggtggtggtggtg
gggtgagtctgaaacctaaagaagtgggggagaatggtgcagctggaggagaagaggacg
atgatgactatcaggtgtactatctgaacccccaggaggttgcgaaggaagaggaggaga
aggcggagggagggacagaagaggagcaggacgtctttgctggcataaagcccctggagc
aggagagccgcatggagatcctctttgcctgcgcagaagcactctatgcccacggctaca
gcaacgaggcctgccgcctgaccgttgaactcgccaaggacctgttggccaatcctcccg
acctcaaggtggagcagcccctgaccaagggaaagaagaacaaggtctccaccagcaagc
agacgtggatagcaaccaacaccttgtcgaaagcggcggtcctgctgacggtgctcagcg
agcggcaggaataccacaccctggcgttccagatcggcatgtttgccctggagctgcaga
ggccaccggcctcgacgaaagcgctggaggtcaagctggcctatcaagagtcggagatcg
tggctctgttgaagaagatcccgcttggcaccaacgagatgaacaccattcggggaaggg
ccgaagagctgagggaaggcaccctctgcgactaccgccccgtcttgccgctcatgctgg
ccagcttcatatttgatgtcttgtgcactccagtggtttctccgacaggatcccgaccgc
cgagccgcaactggaacaacgagatgcccggagacgaggagctgggcttcgaggcagccg
tggccgcgcttggcatgaagaccaccgtgagcgaagcagagcacccgctgctgtgcgaag
gcacccggcgggagaagggcgagctggccggggtcctcatgatcacctacaaggacgacc
agtcgaagctgaagaaaatcttggataagctgttagaccgagagagtcaaacgcacaagc
ctcagacgctgagttccttctactcatccagcaagccggcggtggccaatcagaaatctc
cttccaagcacgccagccaatcggctgcgcccattcagcatctcccggggacacctgtgg
cgcaacaggcaggagtggcccccgcggtccagagcagcccctcggaagccttcctagaga
agagcactcaagagacccctcagaggtccccttgcgacccgcctgcggagtccagcgtct
tgaaacaagaagggaaagtccccagccgcctggccctggggaaccgaggcggctacaatg
gccggtgctggggctcaccagtcagacagaagaagaagcatacgggaatggccagcattg
acagcagcgcccccgaaaccacctcggacagctccccgaccctcagccggcggcccctgc
gtggcgggtgggcggccacctcctggggcagaggacaggacagcgacagcatcagcagct
cgtccagcgactcgctgggctcctcctcctccagcgggagccggagagccagtggagggg
cacgcgccaagaccgtggaagtcggcagatacaagggcaggaggcccgagagccatgccc
cccacgtccctaaccagccctccgaagctgctgcacacttctactttgagctggccaagt
cggtcctcgtcaaggccgggggcaacagcagcacgtccatcttcacccacccgtcctcca
gcgggggccaccaggggccccaccgcaacctccacctctgcgccttcgagatcgggctct
acgccctgggcctgcacaactttgtctcccccaactggctctctcggacgtactcttccc
acgtctcttggatcacggggcaagccatggagattggcagcgcggccttgaacatcctgg
tggagtgctgggacgggcacctgaccccaccggaggtggcctccctggccgacagagcgt
ccagagcgagggattccaacatggtgcgtgcagccgctgagctggcgctgagctgcttac
cccacgcccacgccttgaacccaaacgagatccagagagcgctggtccagtgcaaggagc
aggacaatctgatgctggagaaggcttgcatggcggtggaggaggcggccaaggggggcg
gggtctatccggaggttctctttgaagtggctcaccaatggtactggctgtacgagcaga
ctgtgggcgggactctcgcccagcgggaaggagccacgggctgcagtgtcagcggagccc
gggcgccgtgcgaagcggtccgcgggctggcggacaacagagtgacctcggagcccacca
cggtgactgtggccgccgcggtgactgccgcggcaacggtggtgcccgtgatctcggtgg
ggtcaacgatctaccagcagcacactatggcagggccagcgatggctcacgcgcacaccc
aggggctgcacccctacaccaccctccagacccacatcccgtgcagccctcagtacatcg
ggcacccgatccagcacatgccacgtccggctgtcttccccgtgcccggctcggcttatc
cccaaggggtccacccagcattcattggggcacagtacccctactcggtcgccaccccgt
ctttggcggcgacagcggtgtcgtttcccggagtgcctgtcccctccatgacccagattg
ccgtgcatccctaccatgccgagacggggctctcgctgtcttcgaacgtcgcaataggga
gcgtccacgcggcgtccaccttcccggcaatccaggggacttctttgacgagcctgtctt
ctcagcccacccccctcattgcggggggcttcccctcggaggaggagcagcacagccagc
ccgtcagcccccagggcctgcactacctccactcggcctaccgcgtcgggatgctggccc
tggagatgcttggccggagagctcacaatgatcaccccaacaacttctcgcgcagccccc
cctacacggaagacgtgaagtggctcctggggctagcagccaagttaggggtgaactacg
tgcaccagttctgcgtgggcgcagcgaaaggggtcctgagcccgttcgttctgcaggaga
tcatcatggaggccctgcagaggctgaacccagcccacgtccacaaccaccttcgtacgc
ctgccttccaccagttggtgcagaggtgccagcaggcatacatacagtacatccaccacc
gcctgatccacctgaccccggcggactacgacgactttgtgagcgccatccgcagcgccc
gcagcgccttctgcctgacccccatgggcatgatgcagttcaacgacatcctccagaacc
tgaagcgcagcaagcagaccaaggacctgtggcagagggtctccctggagatgaccacct
tctcgccctga
DBGET
integrated database retrieval system
