Gekko japonicus (Schlegel's Japanese gecko): 107109051
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Entry
107109051 CDS
T04299
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gja03016
]
107109051 (TRUB1)
Enzymes [BR:
gja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107109051 (TRUB1)
Transfer RNA biogenesis [BR:
gja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107109051 (TRUB1)
Prokaryotic type
107109051 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
107109051
NCBI-ProteinID:
XP_015265111
LinkDB
All DBs
Position
Un
AA seq
291 aa
AA seq
DB search
MAGTVRGPLLDTIRNKTVAAKLLSLSGLFAVYKPKGPTSADLVNHLKAKLLEEAGLPKPS
RNTRNHILKIGHGGTLDSAATGVLVVGIGEGTKMLSDMLAGSKKYLAIGQLGKATNTFDS
SGKVTEEKPYHQITKEELENVLRKFTGSIMQVPPLYSALKKDGQRMSALVTKGEAVEPKP
ARPVIVYSLSLRNFKPPLFTLDVECGGGFYVRSLVNDIGRELSSCASVQELTRTKQGPFT
LEEHALYEDKWTIDEIARSLEHCMPLLSVEPSRKKLKTELSEEHTVSCEDK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgggacggtgcgaggaccgttgctggacaccatcaggaacaaaacggtcgctgct
aagcttctgtctcttagcggcctgtttgccgtgtataaacccaaagggcccacttcagca
gatctggtgaaccaccttaaggcgaagctattggaagaagctggtttgccaaagcctagt
aggaatacgaggaatcacatcctaaagattggacatggtgggactctagatagtgctgct
actggagtactagtggttggcattggagaaggaacgaaaatgctgagcgacatgttggca
ggttctaagaaatatctagccattggccagctgggaaaggcaactaacacgtttgattct
tcaggaaaagtgacagaagaaaaaccttaccatcagataacaaaagaagagcttgagaat
gttttgcggaagttcacggggagtatcatgcaagttcctccactttattctgccctgaag
aaggatggacagaggatgtcagcactggttacaaaaggagaggctgtggaaccaaagcct
gccaggccagttatagtgtacagtctttctctcagaaacttcaagccacccttgttcaca
cttgatgttgaatgtggcggtggcttttatgtcagaagcctggtcaacgacattggcaga
gagctctcatcctgtgcctctgttcaggagctgacccgaacaaaacagggaccgtttacc
ttggaagaacatgctctttatgaagacaaatggacaattgatgaaattgcccgatccctg
gagcattgcatgcctcttctctctgtagaaccatctcgtaaaaaattaaagacagagctg
tctgaagaacacactgtgagctgtgaagataagtga
DBGET
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