Gekko japonicus (Schlegel's Japanese gecko): 107109130
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Entry
107109130 CDS
T04299
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107109130 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107109130 (CSTF3)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107109130 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
107109130
NCBI-ProteinID:
XP_015265193
LinkDB
All DBs
Position
Un
AA seq
718 aa
AA seq
DB search
MSGETPAGDQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDVRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSGS
ELKALGYKDVSRAKLATMMPDPVVAPSIVPVLKDEADRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEILRRCKLPDSVDEAVRII
TGGLPELSMEGNGPLENNALLNKAVKRPNEDSDDEEEKGSVVPPIHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaaactcccgccggcgatcaggctgctgaatatgtcccagaaaaagtaaag
aaagctgaaaagaaactagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttcccaagttctggcagattctggaaactgtacattgaagctgagataaaagcaaaa
aactatgataaagtagaaaagttgtttcagcggtgccttatgaaagttttacacattgac
ctatggaagtgctacctttcatatgtgcgagaaaccaaagggaagctacccagttataaa
gaaaaaatggctcaggcatacgactttgctctagataaaattggcatggaaataatgtca
tatcagatctgggtggattacatcaattttttgaaaggcgttgaagcagtaggatcctat
gcagaaaaccagaggataacagctgtccgcagggtttatcagcgcggctgcgtgaaccca
atgatcaacattgaacaactctggcgagattataacaagtatgaagagggaataaacgtc
cacttagctaagaaaatgattgaagatcgcagtagagattatatgaatgctagacgtgtg
gccaaggaatacgagactgtaatgaaaggtctagaccgcaatgcaccctctgttccacca
caaaatactccccaagaagctcagcaggtagacatgtggaagaaatatatacaatgggaa
aagagcaatcccttacgtacagaagaccaaaccctcataacaaaaagagtaatgtttgca
tatgagcagtgcctcttggtattgggacatcatccagatatctggtatgaggcggcacaa
tatcttgaacaatccagcaagctactagctgagaaaggggacatgaacaatgctaaactt
ttcagtgatgaagctgcaaatatttatgaaagagcaatcagcactttactaaaaaagaac
atgcttctttattttgcatatgcagactatgaagagagtcgaatgaaatacgaaaaggtg
cacagtatatataaccggctcctggctatagaagatattgaccccactttggtatacatt
cagtacatgaaatttgcaaggcgagcggaaggtataaaatcaggtagaatgatatttaag
aaagcacgagaggatgtccggacccgccatcatgtctatgttacagctgctctgatggag
tactactgcagcaaggacaagtcagtagcctttaaaatttttgagcttgggctaaagaaa
tacggagacattccagagtatgttttggcatacatcgattatctttctcatctgaatgag
gacaataatacaagagtcctgtttgaacgtgtattgacctcagggagtctcccacctgag
aagtctggagaaatctgggcccggtttttagcttttgaaagtaacatcggtgacctggct
agcatacttaaagtagagaaacggagattcacagccttcaaagaggaatatgagggcaaa
gaaacagctctgctagtagacagatacaagttcatggatctgtatccctgctctggtagt
gaactcaaagctcttggttacaaggatgtgtctcgtgcaaaattagcaaccatgatgcca
gatcctgttgtggctccttcaatagtgcctgtgctaaaagatgaagcggacagaaaacca
gagtacccaaaaccagatacacagcagatgattccatttcagccaaggcatttagcacct
cctggtttgcatccggtccctggtggtgtcttcccagtccctcctgccgcagtagttcta
atgaagcttcttccacctcctgtgtgtttccagggcccttttgtgcaagtggatgaactc
atggaaattctgaggagatgcaaactgccagacagtgttgatgaagctgtaaggattatt
acgggaggcctgcctgaactatcaatggaagggaatggacctttggaaaataatgccctt
ctcaataaagctgtcaagagaccaaatgaagattcagacgacgaggaggaaaaaggatca
gtggttcctcccattcatgacatttacagagcacgtcagcaaaagcggattcggtga
DBGET
integrated database retrieval system
