Gekko japonicus (Schlegel's Japanese gecko): 107109155
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Entry
107109155 CDS
T04299
Name
(RefSeq) collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04382
Cornified envelope formation
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04518
Integrin signaling
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107109155
04518 Integrin signaling
107109155
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107109155
09142 Cell motility
04820 Cytoskeleton in muscle cells
107109155
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107109155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107109155
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107109155
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107109155
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107109155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107109155
NCBI-ProteinID:
XP_015265216
UniProt:
A0ABM1JUS9
LinkDB
All DBs
Position
Un
AA seq
1203 aa
AA seq
DB search
MKELEKNLTSTDMSMATKIKITHAMGHPGQPGHRGLPGLDGCNGTTGSPGFPGTDGFPGT
QGPPGRPGPKGPKGEPSFAQGVFKGIKGESGLPGLDGDVGPVGRPGPPGPAGPVGPPGFL
GPPGLPGPPGLKGNMGLGFQGEKGEKGDVGLPGPAGPPPSTGILEFMGFPKGQQGAKGIP
GPKGFPGFLGHPGLPGFGAFGEKGEKGVPGLPGPRGDMRFKGLTGAEGRKGVRGDSGFPG
QDGLPGGKGEWGDIGPPGPTIYVDMDGSIISGPLGDPGIPGTPGPRGDEGTIGLPGPPGQ
PGFPAPVTGSPGRLGFPGVPGLRGETGDPGRETVGFPGPPGRDGPPGFPGAPGLPGPPRD
AGDCACDGGFSGFGLRGELGAPGQPGGSGEVGPKGLPGDPGDIGFQGPPGQSNLFGQPGP
PGQKGEKGEASFTTGRGFRGDPGDVGPRGPSLPGPPGRDGVPGLPGRPGPPGDGGLGFPG
EKGLPGQPGFKGQRGEPGPPGISFPGPNGISGPPGDPGVNGLPGQQGPPGPQGDCCCGEE
FGNGVLDTLGGMTLPCIIPGATGPPGLPGPPGFPGFPGISGDAGFLGLPGSDGTNGFPGK
SGPPGLPGAKGPPGEVLGAERGPQGEPGQPGLPGEKGMTGNPGFPGQKGSDGRPGLPGIK
GGRGEPGPPGTDGPRGPPGPGGPYGIKGIPGPVGTVGLPGAPGCQGLPGDKGQLGDLGPP
GPAGMKGLPGLEGLLGRPGERGLPGPLGRLGPDGNPGFPGSKGEKGSPGLLGFPGMPGLP
GISGASGVKGISGIPGADGITGFPGAQGRKGDRGDRGPPGRPGRPPETVIMAKGDRGDPG
SIGLGGFPGPRGDRGLPGPRGQPGLLGIPGLPSREQGQRGDTGPPGTLGYPGTAGQKGAA
GIVGFPGMPGESGAEGSPGPPGFPGTVGLRGPKGDRGETFGFPGAVGPKGQRGDPGLHGG
RGIEGPKGEPGYSGNIGLTGPKGVPGDLGQEGPPGFPGIRGSQGNGGFPGSPGKQGPPGF
PGLPGIAGVKGHPGPLGLHGLNGLQGTKGSPGTPGPSEIGLPGTAGPPGIKGEQGAPGFQ
AGGPGLPGLKGVAGDAGLPGTLGVPGLQGPPGISFPSLMPGRPGDPGHPGEDGIPGSQGP
PGLRGPPGPAFNQGDTGNAGFPGLPGLPGLRGDMGIPGLAGVPGASGFKDLVILDIREKM
AYQ
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagctagaaaagaatcttacgagtacagatatgtcaatggcgaccaagatcaag
ataacccatgccatgggacaccctggccagccaggacaccgaggtctacctggcctggat
ggctgcaatggtactactgggagtccgggtttcccaggaacagatggatttcctggcacg
caggggccaccgggtcgtcctggcccaaagggtccaaaaggagaaccttcatttgcccag
ggagtttttaaaggaattaagggagaaagtgggcttcctggactggatggtgatgtcggt
cctgtcggccgcccaggtccaccaggtcccgctggcccagttggaccacctggctttctg
gggccaccaggcctcccgggtcccccgggtcttaaagggaacatggggttgggcttccag
ggagagaaaggagaaaaaggagacgtggggcttccaggccctgctggacctccaccttcc
actgggatcctggaattcatgggtttcccgaaaggacagcaaggagcaaagggcattccc
ggccccaaaggatttcctgggttcctaggacatccaggtcttccgggcttcggggctttt
ggagaaaaaggagaaaagggtgtgcctggcttgccaggaccccggggagacatgagattc
aagggattgactggtgctgaaggcagaaagggcgtaagaggtgactccggctttcctgga
caggatggacttccaggaggaaagggcgaatggggcgacatcgggccacctggccccaca
atttatgtcgacatggatggttccataatctcaggtcctctcggagatcctgggataccg
ggtaccccaggccctaggggcgatgaagggaccataggcttaccaggtcctcctggccaa
cctggatttcctgccccagttacaggctctccaggccgcttggggttccctggtgttcca
ggtctccgaggtgaaaccggcgacccaggaagagaaacagttgggttccctggccctcct
ggccgagacggacctccaggtttcccaggagctccagggcttcctggtccaccacgtgat
gcaggcgattgtgcttgtgatggagggttctcaggatttggcctgagaggagagcttggt
gctcctggtcagcctggaggatcgggtgaagtaggcccaaaaggacttccaggagaccca
ggagacatcggctttcaaggaccccctggacaatcgaatttatttggtcagcctggccct
cctggccagaagggagaaaaaggagaagcatctttcaccactggcagaggcttccgggga
gatccaggggatgtaggccccagaggtccgtcgcttccagggccccctggtagggacggt
gtcccaggtttgccaggtcgacctggccctccaggtgacggtggcctgggctttcccggg
gagaaaggtctgccaggacagcctgggttcaagggtcagcgtggtgagccgggtccccct
ggcattagttttccaggcccaaacggaatcagtgggcctccaggtgatccaggagtaaac
ggtcttccaggacagcaaggacctccaggccctcaaggtgactgctgctgcggtgaggag
tttggtaatggagtcttagacactctgggaggtatgacactgccctgtataatccctgga
gcgactggtccccctgggcttccgggtcccccaggatttccaggctttcctggcatcagt
ggagatgcggggtttctgggacttccgggatctgatggaacaaatgggttccctggtaag
tcaggtcctcctggcttgcccggtgcgaaggggccgcctggtgaagtgcttggagctgag
agaggacctcaaggggaacctgggcaaccagggttgccgggagagaaaggcatgactggg
aatcctggatttcctgggcagaaaggatcggatggaaggccaggtctgccaggtatcaaa
ggaggacgtggagaaccaggtcctccaggtaccgatggaccaagaggacctccggggcct
ggaggcccgtatggtataaaaggaataccaggtccagtgggcacagtcggcttgccggga
gcaccaggctgtcaaggacttcctggggacaaaggccaacttggcgatctgggcccacct
ggccctgctggcatgaaggggctccctggtcttgagggtcttctgggacgtcctggtgaa
agagggcttcctgggccacttggtcgtctgggcccagatgggaatccaggtttccctgga
tccaaaggtgaaaaaggttcaccgggcttgctcggtttccctggcatgccaggcctgcct
gggatctctggtgcgagcggggtgaaaggaatatccggtataccaggagcagacggaata
actggctttcctggggcccagggccggaaaggagacagaggcgatcgtggtccccctggt
cgacccggcagacctccagaaacagtcatcatggctaaaggagacagaggagatcccgga
tccatagggcttggtggatttccagggcctcgaggggacagaggactccctgggcctcgt
gggcagccaggccttctgggaatcccggggctaccaagcagagagcaaggacagagggga
gacacaggccccccaggaacacttggctaccctggcactgcagggcagaagggagctgcc
ggcatcgtggggtttccaggcatgccaggagaaagtggagctgagggctcaccagggcct
cctggattcccagggacagtggggttgcgcggcccaaaaggtgaccgaggggagacattt
ggcttccccggggctgtgggacctaaaggtcaacgaggggaccccgggcttcatggtggc
agaggcattgagggaccaaagggcgaacctggatactcaggaaacattgggctaactgga
ccgaaaggtgtgccaggtgaccttggccaagaaggaccaccaggtttccctggaatccgt
ggttcccaaggaaatggaggtttcccaggcagtccagggaagcaaggccctccagggttt
ccggggcttccaggcatagcaggggtaaaaggacaccctggtcctctcggtttgcatggc
ctcaatggcttacaaggcacaaagggatcgcccggaactccagggccaagtgaaattgga
cttccaggcactgctggacctccgggtatcaaaggtgaacaaggtgccccaggttttcag
gctggaggcccagggcttcccggactgaaaggcgttgcgggagacgctggacttcctggc
accttaggtgtgcctggtttgcaaggacctcccggcatctcttttccgtctctcatgcct
gggagacctggtgatcctggacatccgggagaagatggcataccaggctcccaaggaccc
cctgggctacgaggacccccgggccctgccttcaatcaaggcgatacaggcaacgcgggc
tttcctggccttcctggtttgcccggcctcagaggggatatggggatccctgggctagcc
ggagtcccaggagcatcaggattcaaagacctggtgatcctggacatccgggagaagatg
gcataccag
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integrated database retrieval system
