Gekko japonicus (Schlegel's Japanese gecko): 107109255
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Entry
107109255 CDS
T04299
Symbol
RAD54B
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107109255 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107109255 (RAD54B)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107109255 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
107109255
NCBI-ProteinID:
XP_015265322
LinkDB
All DBs
Position
Un
AA seq
899 aa
AA seq
DB search
MRRSAAPSQLLGNSAKKPRFMPPGKANSVYLKKEPDNSDLEIKITKVDEKQQNGSSSVNT
STICGSSPTIAGKSDRGDGENGHLGTGVRSVYRTKTGPACREATEVSRQQEEPSCLTKYF
SAVWCKISKKKHKKWEGDAVLIVKGKSTILKDMEGKDIGRGTGYKAKDLENLDEGQTLKI
GGKEIEVLGVIQEEDFQSGKCFQSGGEIVVDTLTFSQSIVKSFCNPLKNVCKTSTQGNML
KGSQNCKPRHDPCAPNCLVMPRPTVNHQKMFNKVDLPIVDVVVDPHIVNHLRPHQREGVI
FLYECVMGMRVNGRYGAILADEMGLGKTLQCISLTWTLLRQGPYGCKPVIKRVLIVTPGS
LVKNWGKEFQKWLGNERIKVFLVDQDHKVEEFISSPLYPVLVISYEMLLRSLDQIQKTEF
SLIICDEGHRLKNTSIKTTTAIASLSCGRRIILTGTPIQNDLQEFYALIDFVNPAVLGPS
SAYRKVYEEPIIRSREPSATMEEIELGERRAAELTRLTGLFILRRTQGTIDKFLPPKEES
ILFCRPTALQLELYRRLIHSQVVRSYLQGSLENSPQLICIGALKKLCNHPWLLFKTIKEK
DCNPNCDEQEKLNLYGGLLDIFSQEYTLASFLETDSGKLQVLTQLLAAIHKQSPSERVVV
VSNYTQMLNVLQEVCKRHGYSYTRLDGNTPVSQRQQIVDGFNSRFCPAFVFLLSSKAGGV
GLNLVGASHLILYDIDWNPATDIQAMARVWRDGQRHTVHIYRLLTTGTIEEKIYQRQISK
QGLSGAVVDFSKGSEHIRFSVEELRNLFILHEDSECVTHDLLECKCMGKKDDQGLSEELS
VQEDGQLGQSNGKPHSQKTLSMSQLMQWKHLSGEQENLPGPFLKRMKGNITFIFQNVTN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttctgcagctccaagtcaactgctggggaattcagccaaaaaaccaaggttt
atgcctccagggaaagccaattcggtttatttgaagaaagagcctgacaactcagaccta
gaaattaaaataactaaggtggatgagaaacaacagaatggctcatcatctgtaaacacg
tctaccatttgtggctccagtcctacaatagctgggaaatctgatagaggagatggagaa
aatgggcatttgggcactggagtgagatcagtatatagaactaaaacaggcccagcatgc
agagaggcaacggaagtttcaaggcagcaagaggagccaagctgcctcacgaaatatttc
agtgccgtgtggtgtaagatctcaaagaaaaaacataagaagtgggaaggcgatgccgtt
ctcattgtgaagggaaaatccacgatactgaaggacatggaaggcaaagacattgggaga
ggtactggatacaaagccaaagacctggaaaatcttgatgaaggtcaaactctcaagatt
ggaggcaaagaaattgaagtgctgggtgtcattcaggaagaggatttccaaagtggcaaa
tgttttcagtctggtggggagattgtagtagatacgttgactttctcgcaatccatcgtg
aagtcattctgtaatcccctcaaaaatgtctgcaaaaccagcactcaaggaaacatgctc
aaaggctcccagaactgtaaacctcgtcatgatccatgtgcaccaaattgcttagttatg
ccacgcccaaccgtaaatcaccagaagatgttcaataaagtggatttgcctattgtggac
gtggtcgtagatcctcacattgtaaatcatcttcggccgcaccagcgagaaggagtgata
tttctttatgaatgcgtgatgggaatgagagtgaacggtagatatggagctattcttgct
gatgaaatgggcctaggaaaaacgctgcagtgcatttcactcacctggactctcctgcgt
caggggccgtatggatgcaagccggtaataaaacgagttctgatagtcactccagggagc
ctggtgaagaactgggggaaagaatttcaaaagtggctgggaaatgaaagaatcaaggtg
tttttggttgatcaggatcacaaggtggaagagttcatcagttctcccctttatccagtc
ctggttattagttatgagatgcttctacgctccttggaccaaattcagaagacggagttc
agtctcataatctgtgatgaggggcaccgtctgaaaaacacctccattaagaccaccact
gccattgccagcctatcttgtggaagaagaattattcttacaggtactccaatacaaaat
gacctgcaagaattctatgcattaatagacttcgtaaatcctgcagtacttggtccgtcg
tctgcatacagaaaagtatatgaggaacctattatcagatcacgagaaccttcggcaaca
atggaagaaattgaactaggggagagaagggcagcagagctcacccgcttgactggactc
tttattctcagaagaacccaagggactatcgacaaatttctccctcctaaagaggagagc
atccttttctgccgtccaacagcactgcagcttgagctctatcgaaggctaatacattct
caggtggtcagatcttacctgcaagggagtttagagaacagcccacaattaatatgtatt
ggagccctgaaaaaactttgcaaccatccctggcttctcttcaaaacaataaaggagaaa
gactgtaacccaaattgtgatgaacaagaaaaactgaatctctacgggggtctgctggac
attttttctcaagaatataccctggcttctttcttggaaacagactcaggaaaattgcag
gttctgacacagctgctggctgccattcacaaacaaagcccttcagaaagagtcgttgtg
gtatctaattacacccagatgctaaatgtgttgcaagaggtttgcaaacgtcatggctat
tcctacacaagacttgatggcaacactcccgtctcccagcgacaacaaatcgttgatggt
tttaatagcagattttgtccagcatttgtctttctactgagttcaaaggcaggcggtgtg
ggcctgaacctcgttggagcatcccacttaattctgtatgatattgactggaatccagcc
actgatattcaggcaatggccagagtttggagagatggacagaggcatacagtacatatc
tacagacttctgactacaggtacaattgaagagaaaatctatcagaggcagatcagcaaa
caaggtctgtctggggctgttgtagacttctccaagggatccgaacacatccgtttttct
gttgaagaacttagaaacctctttatactgcatgaggattccgagtgtgttacccatgat
ctgctggaatgtaaatgcatgggaaagaaagatgatcaaggactttcagaagagctatct
gtgcaggaagacggccagcttggccaaagcaatgggaaaccccactcccagaaaaccctg
tctatgtcacagctgatgcagtggaaacacttgtctggggagcaggagaatctacccggt
cccttcctcaaaaggatgaaaggaaatatcacattcattttccaaaatgtgaccaattga
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