Gekko japonicus (Schlegel's Japanese gecko): 107109280
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Entry
107109280 CDS
T04299
Symbol
CIITA
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gja01001
]
107109280 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gja04054
]
107109280 (CIITA)
Enzymes [BR:
gja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107109280 (CIITA)
Protein kinases [BR:
gja01001
]
Serine/threonine kinases: Other
TAF1 family
107109280 (CIITA)
Pattern recognition receptors [BR:
gja04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107109280 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_14
LRR_4
NLRC4_HD2
LRR_8
LRR_9
AAA_16
nSTAND_NTPase5
NB-ARC
LRR_Zer-1
LRR_At5g56370
AAA_25
Motif
Other DBs
NCBI-GeneID:
107109280
NCBI-ProteinID:
XP_015265363
UniProt:
A0ABM1JV76
LinkDB
All DBs
Position
Un
AA seq
1205 aa
AA seq
DB search
MNLFQEILPGVREVLSRASAFQIQALLDLMSESGIISREYLQTLLHEKDREDLARKICLT
LVGRQDLLPDSFAPQGHLQFCGDNRGDAWEAKSARTRSLGDTMMGSEVLLAKGYLDLLQS
DLDPQLLYKNIEDDLSTGHAPDVGLEDQDNNLDLFYTVENDGTGEEVCLCSNPGEAYEKI
AELAEYVLKDKPEEPVKDLFGSLNQDDAVTDGCSEPKTQRRSCSDAPEPKRQKLAHSPGL
CSRNSSPAAFPLDASPPEAISLSNFHVQFSVTTISPMGRLPKIFGPPDPVLDTEGIQMFL
AFLPPSPQLDFPLGPAMWDNNVYLVEDAVEEAPEILPLPSEKADKRPESVDAFSRQLKTS
LGERCRFVPAERDVLMDRLYVEGDLLRRHAENRSGRNADLRAGDLEEKERTTVESLFQTL
ERNELGANKAALVLGKAGMGKSLLVQKICLDWSSGRFAQFEFVFRFDCRRLSLLQGKRYS
LRQLLFEFSVDPQEGGDGDVYRYLLQNPDRVLLIFDGFEELQDLEGFSLSSDSLTRKEPW
GIGAVLGGLFQKKALNGCTLLLTSRPKDKLHQYLPRVDKVLEVVGFSPQQAEVYLARYFE
GCPYCGDARDLITSATYLFSYCHNPDLCRIICLVCKSAFEAGDGELPSSLTGLLVRFLLQ
KLGCAADEGTSPKHGNISTLAQIAWSLGQGPQQAPTSVRFPSIQDKEAALKCGIMEPLAS
SDGGEECGYAFSSFVVENFLAALHLVLAKEIKDKRLTKHLWVPSKPKKSLCSWDLVPRFL
AGLLFFRDDRSSSSLFGEEGEVDPEKMIAKKRNSLCRYIRKLEMESFGPDKLLEVFHCVR
ETEDPFLLQHLALRVRPALSFFGFPFTPPDVYVLHSVLRKANKEFALDLRRSSVGSEGLG
RLVCLQNVTSFRAPLGDTVQLWERLWETAGGERLRSAVEKFVIDPFKAQTVKDVDDLSAL
VDMQEKMRRSKVLVLAFLKGLLTSREGICREHPFRDSGCNQRRRRGLEAPYLLREAGPSG
CDVVREVPAVVDLRHLEFALGPTCGLKGFKKLVEILGAFPALRHLDLDSQKENEIGDEGA
AALSDVLPALRSLETLNLSQNKITNMGAEKLANALPSLPSLRTLSVYNNSIGDAGAENFA
KVLPELTSLRVLNVQCNKITAAGAQRLTDSLRKCPHIQSVALWNPKIPHGILKHLRQLDS
RIRSL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttccaggagatcctgccgggagtgcgagaggtcctgagcagggcttcggcc
ttccagattcaggccctgctggacctcatgtccgaatcgggcatcatctccagggaatac
ctccagactttgctccacgagaaagacagggaggatctagcgaggaagatctgcttgact
ctggtgggaaggcaggacttgcttccggactcctttgcgcctcagggtcacctgcagttc
tgtggcgacaaccgaggagatgcgtgggaagcgaaatcggccaggactagaagcttgggc
gataccatgatgggctcggaggtcctacttgcgaaaggttacctggacttgcttcaaagt
gacttagacccgcagctgctgtacaagaacatcgaagatgacctttccacaggccacgct
cctgatgtgggtctcgaggaccaggacaacaacttggatctcttttacacggtggaaaat
gatgggactggggaagaggtctgcctgtgttccaatccgggagaagcctatgagaaaatc
gctgaactcgcagaatatgtgctgaaggacaagccggaagaacccgtcaaagaccttttt
ggaagccttaatcaagatgatgctgtgactgacggttgttccgagccaaagacacaacga
cgtagctgttccgatgctccagaaccgaaacgccagaaacttgcacattcaccaggcctc
tgctccagaaacagtagcccggcagcatttcccctggacgcgtctccgccggaggccatc
tctctctccaacttccacgtgcagttttccgtgaccaccataagccccatgggcaggctt
ccaaagatattcgggcctcccgacccggtgctcgatacggaaggtattcagatgttcctg
gcctttctgcctccttctccacagctggatttcccgcttggaccggcgatgtgggacaac
aatgtctatctggtggaagacgcagttgaagaagcgcccgagatcctaccgcttccttct
gagaaagctgacaaaagaccagagagcgtggatgccttttccaggcagctgaaaacctcc
ctgggggaaaggtgccgctttgtgcccgcggagcgagacgtcctcatggaccgcctctac
gtcgaaggcgacctcctgcgacgccacgctgagaaccggagcgggagaaatgccgacctc
agggccggcgacctcgaagagaaggagaggacaacggtggagagcctgttccagacgctc
gagaggaacgaactcggggccaacaaggcggctctcgtcttggggaaggccgggatgggg
aaaagtctcctagtccaaaagatctgtctggactggtccagcggccggtttgcccagttt
gagttcgtcttccgcttcgattgccggcggctgagcctgctccaggggaaacgctacagt
ctgaggcagctgctcttcgagttctccgtcgaccctcaagaaggaggggacggcgacgtc
taccggtatctgctgcagaaccctgacagggtcctcctgatctttgacggctttgaagag
ctgcaggacctagagggcttctccctgtcttccgacagcctgacccgtaaggagccctgg
ggcatcggcgcagtcctcggcggtctcttccagaagaaggcactcaacggttgcaccctg
ttgctcacttcccggcccaaagacaagttgcaccagtatttgcccagggtggacaaggtc
ctggaggtggtggggttctccccgcagcaggccgaagtctacctggccaggtattttgaa
gggtgcccctactgcggagatgcacgggacctcatcacaagcgcaacttatcttttcagc
tactgccacaatcccgacctgtgtcggatcatttgcctcgtctgcaaatctgccttcgaa
gccggagacggagaactgccttccagtctcaccggccttcttgtcagattcctccttcaa
aagctggggtgtgcagctgatgaaggaacgtccccaaagcacgggaacatctccacctta
gcccaaattgcatggtctctgggacaaggcccgcagcaggcgccgacgagtgtgcggttc
ccctccatccaagacaaggaagcggctttgaaatgtgggatcatggagcccctggcgtca
agcgatggcggggaagaatgcggttatgcgttttctagtttcgtggtggagaatttcttg
gcggccctgcatctggtcctcgccaaagagattaaggacaaaaggctcaccaagcacctc
tgggtgccgtccaagcccaagaagtctctctgctcgtgggacttggtgcctcgcttcctg
gccgggttgctcttcttccgggatgaccggagctcttcttccctcttcggagaggaaggg
gaggtggacccagagaaaatgatcgccaagaaacggaacagcctctgcaggtacatccgg
aagcttgagatggagagtttcggcccggacaagctgctggaggtcttccactgcgtccgc
gagacggaagacccgtttcttctgcagcacttggccctgagggtcaggccggccctctcg
ttctttggcttccccttcacccctccggatgtctacgtcctgcactccgtcttgagaaaa
gccaacaaggagtttgctttggacttgagaaggagctctgtgggttcggaaggactcggg
cgcttggtctgcctccagaacgtcacgtcgttcagggcgccacttggggacaccgttcag
ctctgggagcgcttgtgggagacggcgggaggcgagcggctgcggtcagccgtcgagaaa
ttcgtcatcgatcctttcaaagcccagacggtgaaggacgtggatgacctctctgccctt
gtggacatgcaggagaaaatgagacgcagcaaagtgctggtcctggctttcctgaagggg
cttctgacgagccgggaaggtatctgcagggaacaccctttcagagacagcggctgcaac
caaaggaggaggcgtggcttggaagcgccgtacttgttgcgcgaggcgggcccatccggt
tgcgacgtcgtccgcgaagttccggccgtggtggatcttcgacacctcgaatttgcgttg
ggacccacctgtggactgaaaggattcaaaaaattggtggagattctgggcgcgtttcca
gctctccggcatttggacttggattctcaaaaggagaacgaaatcggggacgaaggcgcg
gcggccctcagcgacgtgcttcctgccttacgctccctggaaacactgaacttgtcacag
aacaagataactaacatgggagcagagaagctagccaatgctcttccttctctgccttca
ctcaggacgctgagcgtgtacaacaacagcattggtgacgctggagcagaaaactttgcg
aaagtgctcccggaactgacctctttaagagtgctgaacgttcagtgcaacaagatcacc
gcagcaggggcccagcgtctgaccgacagcctgaggaaatgcccccacatacagagcgtg
gcgctgtggaaccccaagatcccccacggaattctcaagcaccttcggcagctggattct
cgaatcagatcgctctag
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integrated database retrieval system
