Gekko japonicus (Schlegel's Japanese gecko): 107109598
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Entry
107109598 CDS
T04299
Symbol
COL11A2
Name
(RefSeq) collagen type XI alpha 2 chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107109598 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107109598 (COL11A2)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107109598 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
107109598
NCBI-ProteinID:
XP_015265746
LinkDB
All DBs
Position
Un
AA seq
1912 aa
AA seq
DB search
MLCILGTWNKSGSVSGVLAPLVYLLRAADPVDVLKVLQLQSQPQGVRKTTGFCPKRRSGT
GPDVAYRISRQAQISAPTRQLFPGGKFPEDFSIMALVKPKSGLQAFLLSIYNQHGIQQLG
VELGRSPVFLYEDQNGRPAPEDYPIFRGVNLADGKWHRVALSVSKKQVTLFLDCKKKMSR
PLPRGNQPLIDTRGITVFGTRLLDEEAFEGDIQQLLISASSQAAYDYCEHYSPDCDGVAQ
KPQAQEAQQRASRAQYSDEDAEDYYGYTYYYGPGMDGTDSPSVPLGGASEQKAAKAKTPA
KPKPKQPQKRQLMGTSPSYAKTGTKNGKDPGHPKYPGNGKSPNNGKYPGNGKSPSGNGKS
YGGGGGGSSKAASAGKSSATKNSPGKSGNQAYAGTGGVRSPGNSYQQDVGLQPTEEPWGV
HEYPDYTLPPDAEGTYWDGSPAGEASSPAPSSPRGEEEVSGPRPAEEEVFTEEEVPGVGL
EYEYGQAHYGEGAEPSELGPVLSAETPHSGGAVRGARGYKGEKGEPAVIEPGMLVEGPPG
PEGPPGISGPSGTQGPPGPPGDPGERGAPGRSGLPGSDGVPGPPGTSMMLPFRFGSSGGE
KGPAVSAQEAQAQAILQQARLALRGPPGPMGYTGRSGPLGQPGNPGIKGEAGDFGPQGPR
GPAGLTGPPGKSGRRGRAGADGGRGMPGEHGVKGDRGFDGLPGLPGEKGHRGDSGAQGLP
GPHGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPGVRGMDGPHGPKGNLGPQ
GEPGPPGQQGTPGTQGLAGPQGPMGPPGEKGPNGKPGLPGMPGSDGPPGHPGKEGHPGTK
GNQGPSGPQGTIGYPGPRGAKVKEGERGRKGHRSPRGEEGFPGFKGDMGVKGDRGEVGVP
GSRGEDGPEGPKGRTGPHGDPGPLGLLGEKGKLGVPGLPGYPGRQGPKGSQGFPGFPGTN
GEKGGRGLSGKAGPRGERGPTGPRGQRGPRGATGKLGAKGTSGSEGPAGPLGERGLPGPQ
GPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGTTGPPGVVGPQGPAGETGQMGER
GHPGPPGPPGEQGLPGPSGKEGTKGDPGPPGGLGKDGPAGLRGFPGERGLPGTPGGGGLK
GNEGPAGPPGPAGSPGERGTPGSGGPIGPPGRPGPQGPPGPAGEKGVPGEKGPLGPAGRD
GVQGPVGLPGPAGPPGGPGEDGDKGEGGDPGQKGAKGGKGEHGPPGPPGPLGGVGQPGAA
GADGEPGARGLQGHFGPKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPP
GPRGPAGPAGADGPQGPPGGLGNLGPPGQKGEPGEQGGPGVTGEPGGKGPRGERGEKGEA
GAAGVPGPPGGKGPTGDDGPKGNPGPVGFPGDPGPPGEMGPRGQDGAKGERGEDGEPGEA
GSPGPTGENGPLGPQEKRGPAGTPGPEGRQGEKGAKGEPGALGPSGKTGPVGPQGTPGKP
GTDGLRGIPGSVGAQGKPGATGQAGPPGPLGPPGLPGLRGDSGPKGEKGHPGLIGLIGPP
GEQGEKGDRGLPGPQGNKGPKGETGIPGPTGPLGPGGPPGLPGPAGPPGPKGATGQAGPK
GQRGFPGPPGHPGPPGEVIQPLPIQRPKKNKRSIDASQLLPEVEEAMASDTAGRSPSEGM
EEIYGSLNSLRQEIEQMRKPLGTPESPGRTCQDLQLCHPDLPDGEYWIDPNQGCSRDSFK
VYCNFTAGGETCIFPSRETQEVKMSTWDKETPQSWFSQFRKGSKFSYVDADGNPLGIVQL
TFLRLLSVSARQNFTYHCQRSVAWHSRGPAPGGYQHALRFLGANEEDMSYDNSPYIKAMV
DGCALRKGSDKTVLEVNTPRVEQLPLLDVRVTDFGEPNQRFGFEVGPVCFLG
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtattcttggtacttggaacaagagtgggagtgtttctggagttctggccccg
ctggtgtacctcctgagggcagcagatccagtggacgtccttaaagtgctgcagctgcag
agtcagccccagggggtgcgcaaaacgacgggattctgccccaagaggcgttcgggaacc
gggccagatgtggcctaccggatatcaagacaggcccagatcagtgctccgacacggcag
cttttcccagggggtaaattcccagaggacttctccatcatggcgctggtgaaacccaag
tccggcctgcaggccttcttgctgtccatctacaaccagcacggcatccagcagttgggg
gtggagctgggccgctcccctgtcttcctctacgaggaccagaacggccgcccggccccc
gaggactaccccatcttccgaggcgtcaacctggccgatggcaagtggcatcgagtggcg
ctgagcgtgagcaagaagcaggtgaccctcttcctggactgcaagaagaagatgtcgcgg
ccgctgccccggggcaaccagccgctcatcgacacccgcggcatcaccgtcttcggcacc
cgtctcctggatgaggaggccttcgagggcgacatccagcagctgctgatctccgccagc
tcccaggcggcctacgactactgtgagcactacagccccgactgcgacggggtggcccag
aagccccaagcccaggaggcccagcagagggccagcagggctcagtattctgatgaggac
gcagaagactattacgggtacacctactattatgggcctggaatggacgggacggattct
ccctcagtgcctctggggggagccagtgagcagaaagcggccaaggccaagacccccgcc
aaacccaaaccgaagcagccccagaagcgccagttgatgggcacgtcgcccagctatgcc
aagacggggaccaaaaacgggaaggaccccggtcacccgaagtatcccggcaacgggaag
tcccccaacaacgggaagtatcccggcaacgggaagtccccctctggcaatgggaagtcc
tacggcgggggcggcggcggcagctccaaggcagcttcggcagggaaatcctccgccacg
aaaaattccccgggcaaaagcgggaaccaggcctacgccggcactgggggagtccggagt
ccgggcaacagctaccagcaggatgtgggtctgcaacccacagaggagccctggggggtt
cacgaataccccgactacaccctcccaccagacgccgaaggcacctactgggacgggagc
cccgcaggggaggcgtcctctcctgcaccctcgtcgccccggggagaggaggaagtgtct
ggcccccgtcccgccgaggaggaggtgttcacagaagaggaagtgcccggagtggggctg
gagtatgaatacggccaggctcattacggcgagggggcagagccatccgagctgggtccc
gtgctctcagccgagaccccacacagcggaggcgcagtgcgaggagcccgcggctacaaa
ggagagaagggagagccggccgtcatcgaaccggggatgttggttgaaggtccccctggc
cccgaaggacctccggggatcagcggtccatcaggcacccagggcccacccggacctccc
ggcgaccctggcgagcggggcgcccctggacgttccggtctccccggctccgacggtgtc
cctggaccccccggcacctccatgatgcttccgttccgctttgggagcagcggaggggag
aaggggccggcggtgtccgcccaggaagcccaagctcaggccatcttgcagcaggcccgg
ctggccttgcgtggccccccaggaccgatgggatatactggccgttctgggcccttgggg
caacccggcaaccccggcataaagggtgaggctggagactttggacctcagggcccgcgg
gggcccgcagggctgaccggcccaccagggaaatcaggccgccggggtcgagccggagct
gacgggggccggggcatgcctggggaacatggcgtcaagggcgaccgcggcttcgacgga
ctcccgggcctgccgggggaaaagggacatcggggtgactccggtgcgcaaggcctccct
ggcccccacggcgaagacggcgagaggggagacgacggagatgtgggaccacgtgggctt
cctggagagccgggaccccgtggtttgctcggccccaaagggcccccaggaatcgcaggc
ccaccgggcgtgcgtggcatggatgggccgcacgggccaaaggggaacctggggccacaa
ggggagccaggcccccccggtcagcagggaaccccagggactcagggtctggccggaccg
caaggccctatggggcctccgggggaaaagggccccaatgggaaacctggcctccccggg
atgccaggctcggacggaccccctggccaccctggaaaagaggggcaccctggaaccaaa
ggaaaccagggcccgtccggtcctcaaggtacgattggctacccaggccctcgtggtgcg
aaggtaaaggagggagagcgtgggagaaaggggcaccgcagcccgagaggagaagaagga
tttcctggcttcaagggggacatgggggtgaaaggcgaccggggggaagttggtgtcccg
ggatcccgaggcgaggacggcccggagggccccaaaggtcggacgggcccccatggagat
ccaggcccccttgggcttctcggagagaagggaaagctgggagttcccggcctgcctggc
tacccggggagacagggtcccaagggctcgcaaggtttccctggattccctgggacaaac
ggcgagaaaggcggacggggtctctctgggaaggcgggcccccgaggcgaacgtggacct
accggccccagaggtcagcgcgggccacgaggagccacggggaagctcggagcgaagggc
acctctggcagtgaaggacccgcgggacctctcggggagcggggtctgccgggacctcaa
gggccaaacgggttccccggaccgaaaggacccccgggtccccccgggaaggacgggctg
cccggccaccccggacagcgtggagaagttggctttcaaggcaagaccggcaccactgga
cctccgggggtggtgggaccccagggaccggcaggagaaacgggacagatgggggagaga
ggtcacccgggcccaccaggaccccccggggagcagggcctgcctggaccgtccggaaaa
gaaggcacgaagggggatcccggccctcccgggggccttggaaaggacggcccagcggga
ctgcgaggcttccctggagaacgcggcctgccggggactcctggcgggggtggtttgaaa
ggcaacgagggacccgccggacccccaggacctgccgggtctccgggggagagggggaca
cctgggtctggaggccccatcggacccccgggaaggcccgggcctcaaggacctcctggc
cctgcgggggagaagggtgtgcctggcgagaaaggtcccctcggccccgccggccgtgac
ggagtccagggtcctgtcgggctgcctggtccagccggacccccggggggcccaggtgag
gacggcgacaagggcgaagggggcgatccgggacagaagggagccaagggcggcaaaggg
gagcatgggccacccggccctcccggcccattgggaggcgtcgggcaaccgggagcagca
ggtgctgacggggagcccggagcgagaggtctccagggccactttgggcccaaaggcgac
gaggggacgcgagggttcaacggcccccccgggcccatcgggttgcagggtcttccggga
ccgtctggggaaaagggcgagacaggagacgtggggccaatgggaccccccggacccccg
gggccacgaggcccagccggacctgccggtgctgacggtccccaaggcccccccggaggc
ctgggaaacctgggccccccagggcagaagggggagccgggggagcaaggaggaccgggg
gtcactggagagccaggcggaaagggcccgcggggtgaaagaggcgagaagggggaagca
ggggcagccggcgtgcctggacctccgggtgggaaaggcccgactggggatgacggaccc
aagggaaacccaggtccagtcggtttccccggagatccagggcccccaggggaaatggga
ccccggggccaggacggagccaaaggcgagcggggagaagacggagaaccaggggaggcg
ggttctccgggaccaaccggtgagaacggtcctcttggccctcaggagaagaggggtcct
gctggcacgccaggtccggaggggcgccagggggagaaaggggccaagggagaaccgggt
gccctgggaccttcagggaagacggggccggtcgggccgcaggggacgcctgggaaacct
ggaacggacgggctgagaggcatccccggatcagtgggcgcacaaggcaaaccaggggcc
acgggtcaggctggccccccgggaccactgggccctcccggtttgcctggactgagaggc
gactctggacccaaaggagagaaggggcaccctggtctcattggcctgatcggacccccg
ggagagcagggagagaagggagaccgggggctacctggcccccaaggcaacaaggggcca
aaaggagagaccggcattccgggcccaactggccccctcggcccaggagggccccccgga
cttccaggtccagctggccccccaggtcccaaaggagccacgggtcaagcaggtcccaaa
ggtcagcgtggatttcctggaccccccggacacccgggcccccctggcgaagtgatccag
ccgctgcccatccagaggcccaagaagaacaagcggtccatagacgccagccagctcctc
ccggaggtggaggaggcgatggcctccgatacggccggccgatcgccctcggagggcatg
gaggagatctacggctccctcaactccctgcggcaggaaatcgagcagatgaggaagccc
ctgggcaccccggagagccccggccgcacctgccaagacctgcagctctgccacccggac
ctgcccgatggcgaatactggatcgaccccaaccagggctgctcgagggactccttcaag
gtctactgtaactttactgcagggggcgagacgtgcatcttccccagccgggaaactcag
gaggttaagatgtccacatgggacaaggagaccccccagagttggttcagccagttccgg
aaaggcagcaagttctcctacgtggatgctgacggcaaccccctgggcattgtccagctg
accttcctgcggctgctcagcgtctcggcccggcagaacttcacctaccactgccagcgc
tcagtggcgtggcacagccgtggcccggcccccgggggctaccagcacgccctgcgcttc
ctgggcgccaacgaggaggacatgagctacgacaacagcccctacatcaaggccatggtg
gacggctgcgcgttgcggaaagggtcggacaagaccgtgctggaggtgaacacgccccgt
gtggaacagctccccctgctggacgtgcgggtgacggactttggggagcccaatcagcgg
ttcggattcgaagtggggcccgtgtgcttcctcggctag
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integrated database retrieval system
