Gekko japonicus (Schlegel's Japanese gecko): 107109633
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Entry
107109633 CDS
T04299
Symbol
TAF1B
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107109633 (TAF1B)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
107109633 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
BP28CT
Motif
Other DBs
NCBI-GeneID:
107109633
NCBI-ProteinID:
XP_015265789
UniProt:
A0ABM1JWF2
LinkDB
All DBs
Position
Un
AA seq
595 aa
AA seq
DB search
MEEEEETRNYNEPCPQCSEVNWGLTDEGAFYCRSCHNVIERTTDVLSEDPTSNARAQSIS
RGLKKKTKFEKGLEWYICEGFQYILQKQAEALQSLGVSSQMKDEVLWNLWKNYLQKSMQP
CYDKFFNDATGDALPQSSDTDSGANTELDIFRLLGLSGSESSIGDTSSALSEMSDWSGSV
DAHSYLRNKKKGDVSMSMPMTLAFCYMALLWLRESITLSDLLRLVMDGHIPYMNAYKDFP
EEMKVYGIDFKIFHVESWPAYENVHKKMQFLATYLELPRFPDIAEDSFFHPNVLCMKYLM
EANLPDDMHNWTCRVVEEIGIGEVDFLTFQPGNKLVRKVKYDIIAVAVVIVVLKILFLLN
DEYEWQLSNYADKRNKNNQEGCPVFDIRKWYMVVKKAMDEEQKKLEEERVRYLYKAKMVT
VLQRQFRSLSGAVEHTEKKKPSSFQLHWTEDDPERPCFHGHSLDGILQQEGHTLTIQGTD
YWLCTAKLCKKNTCGHLAHYKESDFPHTYQFVLSLFSFILRVPPSLIHEEVCAIEHRLFY
SEVHERPRIRQDKKAASRKDHRLEQQCEDLHAVSDTAHAVDLVLPVTTTESRGLD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaagagacgagaaactacaatgaaccctgtccccagtgttcagaagtc
aactggggccttaccgatgaaggcgcattttactgtagatcctgccacaatgttattgaa
cggactacagacgttttatctgaagatcctacttcaaatgccagagcacagtctatctct
agaggattaaaaaagaaaaccaaatttgagaaagggttggaatggtacatctgtgaagga
tttcaatacatactccagaaacaagctgaagcgctgcagtctttaggtgtttcttcacag
atgaaggatgaagttctgtggaatttatggaaaaattaccttcagaagagcatgcagcca
tgttatgacaaattcttcaatgatgctaccggtgatgccttgcctcagtcatctgacacc
gatagtggagcgaacacagaactagatatttttagacttcttggtttgtctggatcggaa
tctagcattggagacacttcttcggctttatcagaaatgtctgactggtctggatcagta
gatgcgcactcatatttacggaacaagaagaaaggagatgtgagcatgtcaatgccaatg
accctggctttctgctatatggcattgctgtggttgagggaatccattacattatcagat
ctcttaaggctggtaatggatggtcacattccttacatgaatgcatataaagatttccca
gaggagatgaaggtgtatgggattgacttcaagatcttccatgtagagtcttggcctgct
tatgaaaatgttcataaaaaaatgcagttccttgcaacatacttggagctgccccgtttt
ccagatatagcagaggacagcttctttcatccaaacgttctctgcatgaagtatttaatg
gaagccaacttgcctgatgacatgcacaattggacttgtagagtggttgaagaaattggc
attggtgaagtggactttctgacatttcagcctgggaataaattggttcggaaagtgaaa
tatgatattatcgcagtagctgttgtcatagtggtgctgaaaattctatttttgttgaat
gatgaatatgaatggcagctgtcgaactacgctgacaagagaaacaaaaacaaccaagaa
ggctgtccagtttttgatatcaggaaatggtacatggttgtaaagaaggctatggatgag
gagcagaagaaactggaggaagaaagagtcaggtatttatacaaagcaaaaatggtaaca
gtccttcaaagacagtttcgctcattgtctggcgctgtggagcacactgagaagaaaaag
ccttcaagtttccagcttcactggacagaagacgacccagaaaggccttgttttcatggg
catagtctggatggaattttgcaacaagagggccacacccttactattcagggcacagat
tattggttgtgtacagcaaaactgtgcaagaagaatacatgtggtcacctggcgcactat
aaagagtcagactttcctcatacctaccagtttgtgttaagcctgttctccttcatcctg
agggtcccaccctctctcatccatgaagaagtgtgcgctatagaacacaggctcttctat
tcagaggtccatgagagacccagaattcgccaagataaaaaagcagcaagtcgtaaagac
cataggctggaacaacagtgtgaagacctgcatgcagtaagtgacacagctcatgcagtt
gacttggtgcttccagtgaccaccactgaaagcagaggactggactga
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