Gekko japonicus (Schlegel's Japanese gecko): 107109765
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Entry
107109765 CDS
T04299
Symbol
ATG16L2
Name
(RefSeq) autophagy related 16 like 2
KO
K20868
autophagy-related protein 16-2
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107109765 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107109765 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
gja03029
]
107109765 (ATG16L2)
Membrane trafficking [BR:
gja04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107109765 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
107109765 (ATG16L2)
Mitochondrial biogenesis [BR:
gja03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107109765 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ATG16
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NWD2_C
Tricorn_2nd
Beta-prop_ACSF4
eIF2A
WD40_RFWD3
TSC22
DUF1664
YabA
DivIC
Motif
Other DBs
NCBI-GeneID:
107109765
NCBI-ProteinID:
XP_015265946
UniProt:
A0ABM1JWV9
LinkDB
All DBs
Position
Un
AA seq
604 aa
AA seq
DB search
MAERGAAGGPWKRHVLRQLQRRDRRTAQTYNKLLEKSFMLGARKLRAESLALRMELPARS
VPEEPADSVGGEVLDSAQMLECLKRSYEEHIVELQRINEELTCEMMERNTILKAKKTALA
EQSNRLASVSGQFFEMEATRRQLKDQVEELSRKNAAVKAECDALRERYRRQDLEFRWAAE
RGLELLKSIMRMKVEAAEHRNEKNERVKQGRLSKELKKATRKPVDIGIEPEEGKEEEQKM
ARTAVPKPESREKPWRRPFRSASATSMTLTRYVDVFKGMFDFRLKRGNSVSSPSEDHYCR
LPSCVAACLPSVVSDTKEAHLSEINAVKFSPSSNMVATGGTDRLVRLWSVAGGRLEHMQM
LEGATGGITSLDFDPSGYHLLGASYNNVAQLWKIGDGKCREILTGHADKVTAAKFRSTRH
QAVTGSRDRTVKEWDLCKGACSRTINVFSYCNDIACCDTVIISGHHDKTIRFWDSREPGC
TQVIPEEGKVTSLSISADQLHLLSCSRDNALKVIDLRMHNVRQVFRAEGFKCGSDWTKAV
FSPDKSYALVGSADGTLFLWNIETGHLESSLAAVHGSSVNAVAWSPSGLYIGSVDQCRKL
VLWT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgcggcgctgcgggcggcccctggaagcggcacgtcctccggcagctgcag
cggcgcgaccggcgcacggcccagacctataacaaactcctggaaaaatccttcatgctg
ggcgcccgcaagctccgcgcggaatcgttggctctccggatggaacttcccgccaggtca
gtcccagaggagcccgcagactccgtggggggtgaagtcctggactcagcccaaatgctg
gagtgcctgaaaaggagctacgaggagcacattgtggagttgcaacggatcaatgaggaa
ctgacctgcgagatgatggaacggaacacgatcctcaaggcaaagaaaaccgccctggcg
gaacagagcaacaggttggcttccgtgagcggacagtttttcgagatggaggccacgcgt
cggcagctgaaggaccaggtggaagagctgagccgcaagaacgccgccgtgaaggccgag
tgcgatgccttgcgcgagcgctaccggcgccaagacctggagttccgctgggcggcagag
aggggcctggagcttctcaaaagcatcatgcggatgaaggtggaggctgccgagcatcgg
aatgagaagaatgagagggtgaagcaaggcaggctgtccaaggagctgaagaaggccacc
aggaagcccgtcgacattgggatagaaccagaagaagggaaggaagaagagcagaagatg
gccaggactgcagtccccaagccggagagccgtgagaagccgtggagaaggccctttagg
tctgcctccgccacctccatgactctcacccgatacgtggatgtcttcaagggtatgttt
gatttcaggctgaagcgcgggaattcggtcagcagtccttccgaggaccactactgccgc
ctgccttcttgtgtggccgcttgcctcccctccgtcgtgagtgacaccaaggaagcccac
ctctccgagatcaacgctgtcaagttcagccccagttcaaacatggtggccacgggtgga
acggacaggctcgtcagactgtggagcgtggctggaggtcgccttgagcacatgcagatg
ctggaaggagctactgggggcatcaccagcctcgacttcgacccgtcgggatatcacctc
ttgggcgcttcctacaacaacgtggctcagctgtggaagattggagacggaaagtgccgc
gagatcctcaccggtcacgcagacaaggtgacggcggccaagttcaggtccacccggcac
caggcggtgacaggcagccgagaccggacggtgaaggagtgggatttgtgcaagggagca
tgttccagaaccatcaacgtcttctcctattgcaacgacatcgcctgctgcgacaccgtc
ataatcagcggacaccacgacaagacgatccggttctgggacagcagggagcccggctgc
acgcaggtgattccagaggagggcaaggtgacttccttgagcatcagcgccgaccagctg
cacctgctgagctgctcccgagacaacgccctcaaagtcatcgatctacgcatgcacaac
gtccggcaggtgttcagggccgaaggattcaagtgcggctccgactggaccaaggccgtg
ttcagcccggacaagagctacgccttggtgggttctgccgacggcaccctcttcctctgg
aacatcgagacgggccatctggagagcagcttggcagcggttcacgggtcttcagtgaac
gcggtggcctggtctccctccgggctgtacattggaagcgtggaccagtgtcggaagttg
gtcctgtggacgtag
DBGET
integrated database retrieval system
