Gekko japonicus (Schlegel's Japanese gecko): 107109963
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Entry
107109963 CDS
T04299
Symbol
COL8A1
Name
(RefSeq) collagen type VIII alpha 1 chain
KO
K23455
collagen type VIII alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107109963
NCBI-ProteinID:
XP_015266161
LinkDB
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Position
Un
AA seq
737 aa
AA seq
DB search
MAVLLAPTWLLVVVVTIYIGLLRSTQAGAYYGIKQMPPQVPQYQALGQQGQQVPHMPMGK
DGIPLQRMGKEGPPPMPYGKEYIPQFLKEIPPLPMLGKERISKKQKEIPSIGLRGERGPP
GEPGPRGPTGPPGIPGHGVPGAKGKXXXXXXXXXXPGLPGKPGPMGPPGPRGEMGPKGEI
GPMGIPGPQGLPGPHGLPGIGKPGDRGLPGQPGPKAEPGMKGQPGIQGPTGPKGDKGVGI
PGLPGLKGPPGLPGPPGPVGLPGIGKPGLTGFPGPQGPAGKPGLPGKPGPQGLNGAPGIQ
GPPGLPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGV
PGPLGPKGEKGHMGPPGMGGPPGEPGQPGLPGLMGPSGAMGFPGPKGEVGVVGPPGPLGP
KGELGLQGFPGKPGFPGEVGPPGLRGLPGPMGPKGEVGHKGLPGLPGAHGPMGPKGEPGI
PGAQGHQGPSGIPGIAGPSGPIGPPGLPGPKGERGVQGPPGFPGMGKPGIAGVQGPPGKP
GMIGLPGQPGSQGPPGPPGPPGPPVIVQPTPPAIGQYLPEMGPGIDGVKTPHGYMGKKGK
NGGVAYEMPAFTAELTTPFPRVGVPVMFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAYHI
HCKGGNVWVALFKNNDPLMYTYDEYKKGFLDQASGSAVVQLMQGDRVYIQMPSEQAAGLY
AGQYVHSSFSGYLLYPM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgctagcaccaacttggctattggtggtggttgtaaccatttacattggg
ctactgagatcaactcaagctggtgcttattatgggatcaagcagatgcctccccaagtc
ccacagtaccaagcccttggccaacaaggacaacaagtacctcacatgccaatgggcaaa
gatggcattccactgcagcgcatgggcaaggaggggccaccacccatgccatacgggaaa
gaatatatccctcagtttttgaaagaaatcccaccactacctatgcttggcaaggagagg
atttcaaagaaacagaaagaaatcccatcaattggtttgagaggagagcgtggtcctcct
ggggagcctggaccaagagggcccactggacctccagggataccaggacatggagtgcca
ggagccaaaggaaaanncnnnnnnnnnnnnnnnnnnnnnnnnntgcctggactgccagga
aaaccaggaccaatggggccccctggaccaagaggcgagatggggccaaagggagagatt
ggacccatgggtattccaggaccccaaggcctaccaggaccccatggactacctggaata
ggaaaaccaggtgatcgaggtttgccagggcaaccaggaccaaaggctgagccaggaatg
aaaggacagcctggaatacaaggtcccactggtccaaaaggggataaaggtgttgggatt
ccaggactgcctgggttaaaaggtccacctggtttgcctggtcctccaggtcctgttgga
cttccaggaataggcaagccaggactgactggatttccaggcccacagggacctgcagga
aaacctgggcttccagggaagccagggcctcaggggttaaatggagcccctggaattcaa
ggtcctcctggccttccaggtataggaaagccagggcaagatggaatcccaggtcaacca
gggtttcctggtggaaaaggtgagcaaggtttgccaggtttaccaggacctcctggatta
cctgggatagggaagccaggtttccctggacctaaaggtgaccgtggcatgggtggtgtt
ccagggccacttgggcctaagggtgaaaaggggcacatggggccacctggcatgggtggg
ccaccaggagagccgggccaaccagggctgccaggacttatgggtccttcaggtgctatg
gggttcccaggccctaaaggagaagttggagttgttgggcctccagggccacttggtcca
aaaggtgaacttggcttacagggtttcccaggaaaacctggcttccctggggaagtggga
cctccaggtctaagaggtttaccaggcccaatgggaccgaaaggagaagttggtcacaaa
ggcttacctggtctgcctggtgctcatggacctatggggcccaaaggagaacctggaatc
ccaggagctcaaggacatcaaggcccttctggaatcccaggcatagcaggacccagtggc
ccaattggacctcctggacttcctggacctaaaggggaacgaggtgtgcaaggtccacca
ggctttccaggaatggggaagcctggtattgcaggggtacaagggccacctggcaagcct
ggaatgattggtttacctggccagccaggctcccagggacctccaggacctcctggtccc
cccggccccccagtaatagtccaacccacaccaccagcaattggacaatatttgcctgag
atgggtccaggcattgatggagtaaagactccacatggctacatggggaagaaaggcaaa
aatggtggtgtggcctatgagatgccagctttcacagccgagctcaccactcctttccca
cgagttggggtgcctgtgatgtttgacaagctcctctataatggcaggcagaattataat
ccacagactggcatcttcacctgtgaaatccctgggatttactacttcgcctaccacatt
cactgtaaaggagggaatgtctgggtggctttgttcaaaaacaatgatccattgatgtac
acctacgatgaatacaagaaaggcttcctggaccaagcttcagggagtgccgtcgtccag
ctgatgcagggtgacagagtgtatatccagatgccatccgaacaggcagcaggactctat
gccgggcaatacgtccattcatctttttcaggatatttgttgtatcccatgtaa
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integrated database retrieval system
