Gekko japonicus (Schlegel's Japanese gecko): 107110075
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Entry
107110075 CDS
T04299
Symbol
KATNB1
Name
(RefSeq) katanin regulatory subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gja04812
]
107110075 (KATNB1)
Cytoskeleton proteins [BR:
gja04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107110075 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
RMC1_N
Beta-prop_WDR19_1st
eIF2A
Beta-prop_RIG_1st
WDR54
Beta-prop_NWD2_C
Beta-prop_LRRK2
VPS8_N
Beta-prop_IP5PC_F
PROPPIN
WD_LRWD1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
107110075
NCBI-ProteinID:
XP_015266281
LinkDB
All DBs
Position
Un
AA seq
652 aa
AA seq
DB search
MMAAAVVTKTAWKLQEITAHSSNVSSLVLGKNSGRLLATGGDDCRVNIWSVNKPNCIMSL
TGHTTPVESVKISTSEELIVAGSQSGSIRIWDLEAAKIIRTLMGHKANICSLDFHPFGDF
VASGSMDTNVKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASSSDDHTVKLWDLAAG
KIMCEFTEHTGPVNVVEFHPNEYLLASRSSDRTIRFWDLEKFQVVSCIEEEAIPVRCVLF
NPDGCCLYAGCHDALRVYGWEPERCFDVVMVNWGKVADLSVCNNQLIGVSFSQSIVSSFV
VDLNRVSKCGSGLHGLVRDDKPLVPPVPMGSSLRRIYDRPSTTCSRPQRVKQNSESERRS
PSSEDDREEKESTAEIQNPEDYKEIFQPKNAITRTPPCKSEPFPAPPEDEPTLAKETSRP
SQAADSQTPLPSQENPVPIQRPPVAASTPITRVEPSVIPAARNEPIGLKASDFLPAMKNQ
SLTEIVDDEAMSQIRKGHETMCVVLTSRHKNLDAVRAKWSTGDIKTSMDSAVDINDLSVV
VDLLNIINQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDISREERVLKSSPNISNIIKNKCGLSGRHGSAFCELHLLMAVLE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagctgcagtcgtcaccaagacagcttggaagctgcaggaaattacagctcac
agtagcaatgtttcttcactggtgcttggaaaaaattcgggccggctgctggcaactggt
ggagatgattgtcgggttaacatctggtcagttaacaagcccaactgtattatgagtctg
actgggcacacaactcccgtggagagcgtgaagatcagtaccagtgaagagctgattgtt
gcagggtcacagtcaggctccattcgaatctgggatctggaagctgccaaaattattcgt
actttaatgggtcacaaagcaaacatctgcagcctagatttccatccttttggagacttt
gtagcttcaggctctatggatactaatgttaagctttgggatgttaggagaaaaggctgt
gtctttaggtacaagggtcacacgcaagcagtccgttgtctccgatttagccctgatggg
aagtggctggcatcctcatcagacgatcacactgtgaagctctgggatctggctgccggg
aagatcatgtgcgagttcacagaacacacgggcccagtaaatgtcgtcgaattccatccc
aacgaataccttttggcttctcgtagctctgacagaaccatcaggttctgggacttggaa
aaattccaggtggtgagctgcattgaagaagaggccattcctgtcaggtgtgtgctgttt
aaccctgatggctgctgcttgtatgctggttgccatgacgctctgcgtgtgtacggctgg
gagcctgaacgctgctttgatgtggtcatggtgaattggggcaaggtggctgatttgtcc
gtctgtaacaaccaactgattggagtttctttctcgcaaagcattgtgtcttcatttgtt
gtggaccttaatagagtctcaaaatgcgggtcaggactccacgggctggttagggatgac
aagcctcttgttccgcctgtgcctatgggctcctctctgcgacgcatctatgacaggcca
tcaacgacatgcagcagacctcaaagagtgaaacaaaattcagagagcgagaggcgcagc
cccagtagtgaagacgatagggaggaaaaagaatccactgcagagatccagaatccagaa
gattacaaggagatcttccagccaaagaatgccatcactcgaactccgccctgcaagagc
gagccttttcctgcacctcctgaagatgaacccacacttgcaaaagaaacatccaggcca
agtcaggctgcagacagccaaaccccattgccaagccaagagaaccctgtccccattcag
aggccaccagtagctgcctcaacccctattactagggttgagccctcagtgattcctgcc
gccaggaatgagcccattgggctgaaagcctctgacttcttgccggccatgaagaaccaa
agcctgacagaaattgtagatgatgaggccatgtctcagatccgaaagggccacgagacc
atgtgcgtggtccttaccagccggcacaaaaacctggatgcagtgcgggccaagtggagc
actggagacatcaagacttccatggactctgctgtggatatcaatgacctttccgttgtt
gttgatctcctgaacatcatcaaccagaaggcgtctctctggaagctcgacttgtgcact
gtcgtcttgccccagatagagaaacttctccaaagcaaatatgaaagctacgtccagaca
ggttgcacttcactgaagttgatcctgcagcgcttcttgcccctgatcacggacattctc
gctgcaccaccgtcagtgggggtagacatttcccgagaggagagagtcctgaagtcctca
cctaacatcagcaacatcatcaagaacaaatgtggactcagtggccgccatggcagtgcc
ttctgtgagctgcatctccttatggctgtccttgagtga
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