Gekko japonicus (Schlegel's Japanese gecko): 107110238
Help
Entry
107110238 CDS
T04299
Symbol
BTAF1
Name
(RefSeq) B-TFIID TATA-box binding protein associated factor 1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107110238 (BTAF1)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107110238 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_EZ
Cnd1
UTP20
Arm
Motif
Other DBs
NCBI-GeneID:
107110238
NCBI-ProteinID:
XP_015266474
UniProt:
A0ABM1JYD7
LinkDB
All DBs
Position
Un
AA seq
1843 aa
AA seq
DB search
MVRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLAKVLVHLRSTNWDTRIAA
GQAVEAIVRNVPEWNPTPRPKQEHGCESPVEESSASDRLRFDRFDICRLLKHGASLLGSA
GAEFEVQDDTAGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYTPAPSF
LVHKQPTLQAADLIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVESNEKSNDSTDGEP
EEKRRKVANVIISQPTTDSKLLVDNVPEETNEWPLESFCEEVCNDLFNPSWEIRHGAGIG
LREVLKAHGRSGGKIGDSTIEEMTQQHQDWLEDLAIRLLCVFALDRFGDFVSDEVVAPVR
ETCAQTLGVVLKYMNETGVHKTVAIPLKXLAQEQWEVRHGGLLGIKYALAVRQDLIETLL
PKVLPAITEGLQDLDDDVRAVAAASLVPVVESLVYLQPQKVPFILNILWDALLELDDLTA
STNSIMTLLSSLLTYSQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLSTE
DQSSAAWLIPILQDMLRHIFQFCILESNQEILELIHKVWLELLSKASLQYVVAAACPWMG
AWLCLMMQPSHLPIDLNMLLEVKARSKEKTGGKVRQGQTQTKEVIQEYIAGAESVAEDPA
TRDYVVMRARMMAAKLLGALCCCICDLSVNAVTQEIKPAESLAQLLLFHLNSKSALQRFS
VALVICEWAALQKENKAVALAVQSRLLEVLSEHLYYDEIAVPFTRMQNECKQLISSFADA
NIDIGSRVNCSVFTIDQANELVTTIFSEFTSSFNLNPKVLQQLEGKRQQVQMTVTETNQE
WQTLQLRVHTFVACAVVNLEQLPEKLNPVIKPLMEAVKKEENTLVQNHAALCIAKLLQQC
TTRSPCPNSKIIKNLCNSLCVDPHLTPLASCPAQPQSVHENAKGSNSERGGMHHTVTKHR
GIITLYRHQKAAFAITSRRGPTPKATKTQIGDLPTSSSGNMITELDEAQKPYVVQRRGAE
YTLSTIAKHFGGEMAVGLPHLWDAMVGPLRNNIDINNFDLKLLLEKGDGPAQELVNSLQV
FETTAASMDVQLHSLLVQHLPYLCMCLQHPNTAVRHMAARCVGVMSRIATIETMHIFLEK
VLPWLGTIDDSTKQEGAIEALASVMEQLDVGIIPYIVLLVVPVLGRMSDQADSVRFMATQ
CFATLIRLMPLEAGIPDPPNMSEDLIKIKAKERHFLEQLLDGKKLENYKIPVPIKAELRK
YQQEGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYSRTKTSDSVPLP
SLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHHVKRHNLIVASYDVVRN
DIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRIILSGTPIQNNVLELWSLFD
FLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDV
LQDLPPKIIQDYYCTLSSLQIQLYEDFAKSRAKCDVEETVSSASLTEETEKPKLKATGHV
FQALQYLRKLCNHPALVLTAQHPEHKRITEKLAVENTSLRDIQHAPKLSALKQLLLDCGL
GNGGSPESGTETIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSITYLRLDGSIPAGQRHS
IVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMKDLQAMDRAHRIGQKRV
VNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTDQLLDLFTLDKDGKAEK
SDAATSASGKATMKSVLENLGELWDQEQYDSEYSLEKFMHSLK
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctcgatcgtctctttatcttattggatactggcacaacacctgtaacaagg
aaagccgctgcacaacaacttggggaggttgtgaaacttcacccccacgaattaaataat
cttttagcaaaggtgttggtacacttaaggagtacaaattgggatactcgcattgctgct
ggacaagctgtggaagcaatagtgagaaatgtgccagaatggaatcctactccacgaccc
aaacaagaacatggttgtgagagtcctgtggaagagtcatctgcctctgatcggttgcgt
tttgacagatttgatatctgccgactcctgaagcatggtgcttctcttcttgggtctgct
ggtgcagaatttgaagtccaagatgacacagcaggtgaaattgatcccaaagagaggata
gcacgacaaaggaagctgctccaaaagaagctcggccttgatatgggagctgcaattgga
atgaatacagaagacttgttcaatgatgaggatttggactacactcctgctccatcgttt
cttgtacacaaacaacctactcttcaagctgctgacttgattgattcagaatttcgagct
ggtatgagtagcaggcaaaagaataaagctaagagaatggccaagctgtttgccaaacaa
agatcaagagatgcagtagaatccaatgaaaagagcaacgatagcactgatggggaacca
gaggagaagagaagaaaagtggcaaatgttatcatcagtcagcctacaactgattccaaa
cttttggtagataatgtgccagaagagactaatgaatggcctttggaaagtttttgtgaa
gaagtatgcaatgacctctttaacccatcatgggagatcagacatggtgcaggtattgga
ttgagagaggtacttaaagctcatggaagaagtggaggcaaaataggagacagcactata
gaagagatgactcaacagcaccaggattggctggaggacttggctatcaggcttctttgt
gtgtttgccttagatagatttggcgactttgtttccgatgaagtcgtggcaccagtgcga
gagacttgtgctcaaacactgggagtggtgctgaaatacatgaatgagactggtgttcat
aaaactgtggctatcccgctgaagnttctggcacaggaacagtgggaagtgaggcatggg
ggcctgttggggataaaatatgctttggcagttcgtcaggacttaattgagacgttatta
cctaaagtcttaccagcaataactgaaggtctgcaggatctggacgatgatgtcagggct
gttgctgctgcatctttagtgccagtggtggaaagtcttgtctaccttcagccgcagaaa
gtaccctttattcttaatatattatgggatgcacttctggaattggatgacctgacagct
tctacaaacagcatcatgaccctcctttcatcccttctgacttattctcaggtccgaaaa
tgcagtattcagcaatcactcacggttctggtaccacgtgtgtggccattcctacatcat
acaatatcatctgttcgaaaagctgcactggaaactctgtttactttactgtctacagaa
gatcagagttctgcagcctggcttattcccattttgcaagacatgttaaggcatatcttt
cagttctgtattttagaaagtaatcaagaaattctggagctcattcataaggtgtggctg
gaattgttaagcaaggcatctctgcaatacgtggtagcagctgcttgtccgtggatggga
gcttggctctgtttaatgatgcagccttctcacttgcctattgacttaaatatgttacta
gaagtgaaggccagatcaaaggaaaaaactggtggcaaggtgcggcaaggtcagacgcag
actaaggaggtgattcaggagtacattgctggagcagaaagtgttgccgaagatccagca
accagggattatgttgttatgagagcccgaatgatggcagcaaaattgcttggagcactt
tgttgctgtatttgcgatctgagtgtgaatgccgttactcaggaaataaagccagctgaa
tcgctagcccagctattgcttttccatttgaattccaagtccgctttgcagaggtttagt
gttgcattagtaatctgtgagtgggctgctttgcagaaggaaaataaagctgtggctctt
gctgtccagtcacgtttacttgaagtcctttcagagcatctttattacgatgaaattgct
gttcccttcacgcgaatgcagaatgaatgtaaacaactcatctcctcatttgctgatgca
aacattgacattggcagccgagtaaactgtagtgtgtttacaatagatcaagctaatgaa
ttggtcactaccatcttcagtgaatttacatcctcttttaatttaaatcctaaagtctta
cagcaattggaaggcaagagacaacaagtccaaatgactgttacagaaacaaatcaggaa
tggcaaacactgcagctacgagtgcatacctttgttgcttgtgctgttgtgaacctggag
caacttccagaaaaattaaaccctgtgataaaacctctgatggaggctgtgaagaaagaa
gagaacacactagtgcaaaatcatgcagctttgtgtattgctaagttacttcagcagtgc
acaacaaggtctccgtgtcccaattcaaagattattaaaaacctttgcaactcactctgt
gtggacccacatcttacacctttagcatcatgtccagcccaaccccagagtgtccatgaa
aatgcaaaaggatccaattctgaaagaggtgggatgcatcatacagtcaccaagcacaga
ggtataatcacactgtacaggcatcaaaaagcagcatttgccatcacaagcagacgaggt
cctacaccaaaggccacaaaaactcaaattggtgatctgcccaccagtagcagtgggaat
atgatcacagagcttgatgaagcccagaaaccctacgttgtgcagaggagaggtgcagaa
tatactttatccactattgcaaaacattttggcggtgaaatggctgtgggcttgccacat
ctctgggatgctatggttggtcccttaaggaataacattgatataaacaactttgatcta
aagctgctcttggaaaagggagatggcccagcccaggaattggtgaattctctacaggtt
tttgaaacaacagccgcctctatggatgttcaacttcactctttgttggtccagcacttg
ccttatctgtgtatgtgccttcaacaccccaacactgcagtgagacacatggctgctcgt
tgcgttggtgtaatgagcagaatagctaccatagaaaccatgcacattttcctggaaaag
gttcttccttggctgggtactatagatgacagtaccaaacaagagggtgcaattgaagct
cttgcttctgtaatggagcaactagatgttggaattattccctatatagtcctccttgtg
gtcccagttctgggcagaatgagcgatcaagctgacagcgtacgtttcatggccactcag
tgctttgctacgttaattagattaatgcctcttgaggctggcattccagacccacctaat
atgtctgaagatttaatcaaaattaaagccaaggaacgccattttctggaacagttgtta
gatgggaaaaaactagaaaactataaaattccagtgccaattaaagctgaactcagaaaa
tatcaacaggaaggtgtgaattggctggcttttcttaacaaatacaagcttcatggtatc
ctctgtgatgatatgggcttaggaaaaactttacagtccatttgtattcttgcaggggat
cattgtctcagggctcaagaatattcaagaactaaaacatctgatagtgttccgcttcca
tcattagtagtgtgccctcccacacttacaggccattgggtggatgaagtagggaagttt
tgttccaaagagtatctcaatccactgcattatactggtcctcctacagaaagggcaagg
ttgcagcaccacgtaaaaagacacaacctcattgtagcttcttacgatgttgtaaggaat
gacattgacttcttcaggaatattaaatttaactactgtatacttgatgaaggccatgtc
ataaaaaatggaaaaacaaaattatcaaaagcaataaagcagctgactgccaactatagg
ataatactctctgggaccccaattcagaacaatgtcttggagttgtggtcactgtttgac
ttcctgatgccaggatttctgggcactgagcgccagtttgcagctcgctatggcaagcct
atattggcaagcagagatgctcggagctcaagcagagagcaggaggcaggtgttcttgca
atggaggcattgcacagacaagtcttgccatttttgttgaggaggatgaaagaagatgta
ctgcaggatcttccacccaaaattattcaagactattactgcaccctcagctctctgcag
attcaactgtatgaagattttgccaaatctcgtgccaaatgtgatgtggaagaaactgtt
tcatcagcctcattgactgaggagacagaaaaaccaaagcttaaagccacagggcatgtg
ttccaggctttacagtatttaaggaaactgtgcaaccatccagctttagttttaactgct
cagcatccagagcataagagaatcacagagaagcttgcagttgaaaacacttctcttcga
gacatccaacacgcacctaaactctcggctttaaaacagttgctgcttgattgtggcttg
ggaaatggtggctccccagaaagtggcacagaaaccatcgttgcacaacacaggatactt
atcttctgtcaactcaagagcatgctggatattgtagagcatgacctgctcaagcctcac
ttaccttccattacctacctgcgattagatggcagcatacccgctggtcagaggcattcc
attgtgtcacggtttaataatgatccatccattgatgtcctcttgcttaccacacatgtt
ggcggactggggctaaacttaactggtgcagacacggtggtgtttgtggaacatgactgg
aatccaatgaaagacctgcaagcaatggatcgagcacatcgtattgggcagaaacgagtt
gtcaatgtttatcgcctgataacaagaggaacgttggaagaaaagataatgggtctccag
aagttcaaaatgaatattgcaaatacagtgatcagtcaagagaacactagtttacaaagc
atgggcacagatcagcttcttgacctcttcactcttgacaaggatggaaaagctgaaaaa
tcagacgctgccacttctgcttctggaaaagcaactatgaaatcagtgcttgaaaatctt
ggagaactttgggatcaggagcagtatgactccgaatacagtttagagaagtttatgcat
tcgctcaaataa
DBGET
integrated database retrieval system
