Gekko japonicus (Schlegel's Japanese gecko): 107110332
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Entry
107110332 CDS
T04299
Symbol
PRDM16
Name
(RefSeq) PR/SET domain 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja00310
Lysine degradation
gja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107110332 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107110332 (PRDM16)
03036 Chromosome and associated proteins [BR:
gja03036
]
107110332 (PRDM16)
Enzymes [BR:
gja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
107110332 (PRDM16)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107110332 (PRDM16)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107110332 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
SET
zf-C2H2_11
zf-H2C2_5
C2CH-3rd_BIRD-IDD
Zap1_zf1
zf-BED
DUF7128
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
107110332
NCBI-ProteinID:
XP_015266594
UniProt:
A0ABM1JYQ7
LinkDB
All DBs
Position
Un
AA seq
1181 aa
AA seq
DB search
MGDNEIVNNMYETEADLLAGESAEEEVEDSIMSPIPVGPPSPFPTGEDFNPKEGSPYEAP
VYIPDDIPIPPDFELRESSIPGAGLGIWTKKKIEIGERFGPYMTSPRTTLKETSFGWEQM
LTDPETALQDGCIKKIGEDLSTEKFCVDASQTGNGNGNWLKYIRMACSSEEQNVAACPIN
DQIYYKVIKEIEPGEELLMYMKESTYPAGNMPPSLEEVHTFRCEDCDELFQSKMDLRRHK
KYSCNTVSSLYESLSEEIKQEGAADGQVHECKDCERMFPNKYSLEQHMIIHTEEREYKCD
QCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCG
KTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMF
STTSSLNKHRRFCEGKNHYNPGGIFGPGLPLTPSSMMDKSKPSPNLNHTSLGFNDYFPSR
PHPGGLPFSPGPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQDAKLPSPLG
NPALPLLSAVSNSSHPASGEEKFNSSGLGNSYLEKLKARTSDISDASDFEDVNTTTGTDL
DTTTGTGSDLESDAESDRDKMKDKSNLPESKPDFISSSVSTSSANNMSDIPLFYSQHSFF
PPPEEQLLPTAGAANDSIKAIASIAEKYFGPGFMGMQEKKIGSLPYHSMFPFQFLPNFPH
SLYPFTDRTLNHSLLVKAEPKSPRDLHKMGSSSSESPFDLTTKPKEIKPALPPPKILPTH
PSGEEQPLDLSIGNRIRASQNGSRDSRKNHIYGERKLMASEVLPKISQAQMPPQPSLHYA
KPSPFFMDPIYSRVEKRKVTDSVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKA
DAGASLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGE
QPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENVP
VSQHSGVITNHLGTNASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQSSALADKRC
IEEDEAGLLDLEQMPHFGKGLDLRKASEESFEVKDVYNPSLDSEAIKQTLYRQAKNQAYA
MMLSLSENTPLHPSSQNSLDAWLNMAGAASESGGFNSVGHL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaacgagattgtgaataacatgtatgaaactgaggcagacctcctggcaggc
gagagtgcagaggaggaggtggaggacagcatcatgtctcccatcccggtgggacctcca
tcccctttccccacgggcgaggatttcaaccccaaagaaggctcgccttatgaagctccc
gtctacatccctgacgacattccgatcccgcctgactttgaactgagggaatcctccatt
ccgggtgcgggactgggcatctggaccaaaaagaagattgaaattggggaaagatttggg
ccatacatgacctctccaaggacgacgttgaaggaaacaagctttgggtgggagcaaatg
cttacggatccagagacagctctgcaagacggttgcattaaaaagattggtgaagacctg
agcaccgaaaaattctgcgtcgatgccagtcagactggaaatggaaacgggaactggttg
aagtacatccgaatggcctgctctagtgaagaacaaaacgttgcagcatgtcccataaat
gaccagatttattataaagttattaaagaaatagaaccaggagaagagctgctgatgtac
atgaaagaaagcacttacccagctggaaacatgccacctagtttggaagaagtgcacacg
tttcgctgcgaggactgtgacgagctcttccagtcaaagatggacctgaggcggcacaag
aaatattcctgcaataccgtcagctccctctacgagtctctgagcgaggagattaagcaa
gaaggtgcggctgacgggcaagtccatgagtgcaaagactgtgagaggatgttcccgaac
aaatacagcttggagcaacatatgatcatccacactgaagaaagggagtacaaatgcgac
cagtgccccaaggccttcaactggaaatcaaacctgattcgtcaccagatgtcacatgac
agtggcaagcgatttgaatgtgaaaactgtgtaaaggtgtttaccgaccccagcaacctg
cagcggcacatccgttcccagcacgtcggcgcacgggcgcacgcctgcccggattgtggg
aaaactttcgctacttcgtctggcctcaagcagcataagcacattcacagcactgtcaaa
cctttcatatgtgaggtctgccacaagtcctacacgcagttctccaacctgtgccgccat
aagcggatgcacgccgactgccggacccagatcaaatgcaaggactgcgggcagatgttc
agcaccacctcctcgctcaacaagcaccggcgcttctgcgagggcaagaaccattataac
cccggggggatttttggaccgggcttgcctctgacccccagctccatgatggacaaatcc
aagccgtctcccaatctcaaccacaccagcctcgggttcaacgattacttcccatcccgg
ccgcacccgggaggactccccttttcgcccggccctcctgcatttccagccctgactccc
ggcttcccaggtattttccctccctctctatatcccaggccccctttattacccccgacc
ccgctgctcaagagcccccttaaccacacccaagacgccaagcttccgagccccctgggg
aacccggccctgcccctcctttctgccgtcagcaacagcagccacccagcctcaggcgag
gagaagttcaacagcagcggtctggggaactcctacctggagaagctcaaagccaggacc
agcgacatctcggacgcgagcgacttcgaggatgtcaacaccaccacgggcacggatctg
gacaccaccaccggcaccgggtccgatttggagagcgacgcagagagcgacagggacaaa
atgaaagacaagagcaacctgccagagagcaagccggacttcatcagcagctcggtgtcc
acaagttctgccaacaacatgagcgacatccctcttttctactctcagcattccttcttc
cctccccccgaagagcagctgctccccacggccggggcggccaatgactccataaaggcc
atcgcctccatcgcggagaagtactttgggccgggcttcatggggatgcaggagaagaaa
ataggctccctcccttaccattccatgtttccattccagttcctccccaacttcccccat
tcgttgtaccctttcacggaccggaccctgaatcacagcttgctggtcaaggcagaacca
aagtcgcccagggaccttcacaaaatgggcagcagcagctccgagtcacccttcgacctt
accacaaagccaaaagaaattaagccagccttgccaccccccaaaatcctgcccacccat
ccttccggagaggaacagccactagacctgagcatcggcaaccgcatccgggccagccag
aacgggagccgggactcccggaagaaccacatttacggagagaggaaactaatggccagt
gaagtattacccaagatttctcaggctcagatgccgccgcagccgtcactgcattacgct
aagccgtcaccttttttcatggaccccatctacagcagggtggagaagcggaaggtgacc
gactcagtgggagcactaaaggagaagtacttgaggccttccccgctgctttttcatccc
cagatgtcggcaatagaaaccatgacggagaaactggagagttttgcagccatgaaagca
gacgccggcgcctccttacagccccttccacaccacccgttcaacttccggtcaccaccc
ccaacgttgtctgaccccattttgcgcaagggcaaagaacgttatacctgcaggtactgt
ggtaagatcttcccccgttcagcaaatctgacgagacatctccggacacacacaggagaa
caaccttacagatgtaaatactgcgacagatcattcagcatttcatcaaacctccaacgc
cacgtccgaaacatacacaacaaggagaagccattcaaatgccacctgtgtaatcggtgc
ttcggccagcagaccaatcttgaccggcatctgaagaagcatgaacacgaaaatgttcca
gtgagccaacactccggggtcatcacgaaccaccttgggaccaatgcttcctctccaacc
tcagaatcagacaaccatgcacttttagatgagaaagaggactcgtatttctctgagatc
agaaactttattgcaaatagcgagatgaaccaatcgtcggctctagcggacaaaaggtgt
attgaggaggacgaagccggcttgttagatttggagcagatgccgcattttgggaagggg
ctggatctacgcaaagcatccgaggaatcttttgaagttaaagatgtgtataatccctcc
ttagactctgaggcaattaaacagactctgtacaggcaggctaaaaaccaggcttatgca
atgatgttgtccctttccgagaacactcccctccatccttcttcccagaactctctggac
gcttggttgaacatggcaggagcggcttctgagtcggggggcttcaactccgtcggtcac
ctctga
DBGET
integrated database retrieval system
