Gekko japonicus (Schlegel's Japanese gecko): 107110423
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Entry
107110423 CDS
T04299
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107110423 (PDZRN3)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107110423 (PDZRN3)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107110423 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
Prok-RING_4
PDZ_Tricorn
zf-TRAF
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
107110423
NCBI-ProteinID:
XP_015266727
UniProt:
A0ABM1JZ40
LinkDB
All DBs
Position
Un
AA seq
1062 aa
AA seq
DB search
MGFELDRFNGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
TKELNHVLPLKSLILKLDIKCDNQARGCDKVVKLQHLAEHAEMCDYSPAKCRHKGCAEVL
NLRDVDAHMRESCEARPVGICEQGCGLVLTHREHKAGSHCCLQALKGHNAALAAKLAGLE
KELKKEALRAGKREKSLLSQLSAVQLELQMTALRYQKKFTEYSARLDSLSRSLAAPSPTK
GEETKALTLVLHRDSGSLGFNIIGGRPCMDNQDGSSSEGIFVSKIADSGPAAKEGGLQIH
DRIIEVNGKDLSKATHDQAVEAFKTAKDPIVVQVLRRAPRAKIFSPSHECLLVDMGTQTD
ITFEHIMALTKMGSPTPPVTVLDPYLLPEEHSSGHEYYDPNDYMGGIHQEMDREELELEE
VDLHRVNSQDKFGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEIQ
NREEAVALLTSEESKNVSLLIARPEILQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQF
TANMLQQKKNEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNADDHTTFSN
SLGSQKKLTYSQDTLGSGDMQFSNESFISADCTDADFLGIPVDECERFRELLELKCQVKS
TNAYGLYYHNSTPDMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYREP
WMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPNNS
LCRTAEGLNLQVSEGAEAQGGFQKNLLTCPENQESGTTKPHPKDADPDKQLESKERKATD
GSKSPTQPPKPGGSYLSSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDLNSSNQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAI
SEMKMGRYWSKEERKQHLLKAKEQRRRREFMMQSRLECLKEQQGAEEKKEMNIIELSHKK
MMKKRNKKIFDNWMTIQELLTHGTKSPDGTKVYNSFLSVTTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggatcggttcaacggggaggtggatcccgacttcaaatgcaatctg
tgcaacaaagttctggaggatcctctcaccaccccttgcggtcatgtgttctgcgccggc
tgcgtcctgccttgggtggtgcagcagggcagctgcccagtgaagtgccagcggatctcc
accaaggagctgaaccacgtcctgcccttgaagagcctcatcctcaagctggacatcaag
tgcgacaaccaggcgcggggctgcgacaaggtggtcaagctgcagcacctggccgagcac
gccgagatgtgcgactactcgccggccaagtgccgccacaagggctgcgccgaggtgctc
aacttgcgcgacgtggacgcgcacatgcgcgagagctgcgaggcccggccggtgggcatc
tgcgagcagggctgcggcttggtcctcacccaccgcgagcacaaggccggctcgcactgc
tgcctgcaggcgctcaagggccacaacgccgccctcgcagccaagctggccggcctcgag
aaggagctcaagaaggaagcgctccgagccggcaagagggagaagtcgctcctctcgcag
ctctcggccgtccagctcgagctgcagatgacagcgctgcgctaccagaagaagttcacc
gagtacagcgcccgcctcgactcgctcagccgcagcctggcggccccctcgcccaccaag
ggtgaagaaactaaagcactcacacttgtccttcatcgtgattctggatctcttggattt
aatataattggtggacgaccatgtatggacaatcaagacggctcatccagtgaaggaatt
tttgtctctaaaatagctgacagtgggcctgctgccaaagaagggggactgcagattcat
gacaggattattgaagtaaatggaaaagacttatcaaaagcaactcatgaccaagcagta
gaagcattcaaaacagctaaagatcctattgtagtccaggtccttaggagagcgccacgc
gccaaaatcttcagtccctctcatgaatgtctcctagttgatatgggcacccagacggat
atcacctttgaacacatcatggctttaaccaagatgggctcacctactccaccagttaca
gtgctggatccttacctcttacctgaagagcattcatcagggcatgaatactatgaccca
aatgattacatgggaggcattcatcaagaaatggacagagaggagctagaattagaggaa
gtggatttgcatcgagtgaacagccaagataagtttgggcttactgtgtgctacagaact
gacgatgaagatgatattggcatttatataagtgagattgatcccaacagtattgctgcc
aaagacggtcgcatccgagaaggcgatcgtataattcaaattaatggcatagagatacag
aatcgagaggaagctgtggcgcttctcaccagtgaagagagcaagaacgtctccttgctc
atagcaaggccagagattctccagttggatgaaggatggatggacgatgacagaaatgat
tttctggatgacttgcacatggacatgctggaggaacaacaccaccaggcgatgcagttc
actgccaacatgcttcagcagaagaaaaatgaagaggacggaggcaccacagacacggca
actattttatccaaccaacacgagaaagacagcggcgtaggtcgtaccgacgaaagcact
cgaaatgatgaaagttctgagcaagaaaacaatgcagatgatcacactactttctccaat
agcttgggaagccagaagaaactgacatatagccaggacacgctgggcagtggagacatg
cagtttagcaacgagtcattcatttcagctgactgtacggatgcggactttcttggcatc
ccggtggatgagtgcgagaggttccgtgaactgttggagctgaaatgccaggtaaagtcc
accaacgcttatggtctgtattaccacaatagcaccccggatatgagtaaaagtgatcaa
gaaagtgtggacagggagctggagatgctgaatgaggaactacgcaatattgaactggag
tgcctcaacatcgtgagagctcacaagatgcagcagttaaaagagcagtaccgagagccc
tggatgctgcataacagcggcttccggaattacaacacaagcattgatgttcgccggcat
gagctctcagatatcacagagctccctgaaaaatcagacaaggacagctccagtgcttac
aatacaggggaaagctgccgtagtacacctctcactttggagatctcccccaacaactct
ttatgcaggactgcggaagggctcaatctgcaggtcagcgaaggggcagaagcacagggt
ggtttccagaaaaatttgctgacatgcccagaaaatcaagaatctggcacaactaagcca
cacccaaaagatgctgaccctgacaagcaactggaaagcaaagagaggaaagccactgac
ggaagcaaaagtcccactcagccacccaaaccaggaggctcctacttatcctcataccac
cattccccctataaacatgcccatatccctgcccatgcccaacactaccagagctatatg
cagttgatacaacagaaatcagccgtggaatatgcacagagccaaatgagtttagtgagc
atgtgcaaagacttgaactcttcaaaccagagcgaacccaggatggaatggaaagtcaag
gtgaggagtgacggcacccgctacatcaccaagagacctgtaagggacaggctgctgaga
gaacgtgccataaagattaaggaagaacgtagtggcatgaccacagacgacgacgccatc
agtgaaatgaagatgggccgttactggagtaaggaggaacgaaagcagcatttgttgaaa
gcaaaagagcagaggagaaggcgtgagttcatgatgcaaagcaggttagaatgtctgaag
gaacagcaaggggctgaggagaagaaggagatgaacatcatagaactgagccacaaaaaa
atgatgaagaaaaggaataaaaagatatttgacaactggatgacgatccaagaactctta
acccatggcacaaagtcccccgatggcacaaaggtttacaactccttcctgtcggtgact
acggtataa
DBGET
integrated database retrieval system
