Gekko japonicus (Schlegel's Japanese gecko): 107110586
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Entry
107110586 CDS
T04299
Symbol
PRPF19
Name
(RefSeq) pre-mRNA processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
gja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107110586 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107110586 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107110586 (PRPF19)
04121 Ubiquitin system [BR:
gja04121
]
107110586 (PRPF19)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107110586 (PRPF19)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107110586 (PRPF19)
Spliceosome [BR:
gja03041
]
Complex B
Other components
Prp19 complex
107110586 (PRPF19)
Complex C
Prp19-CDC5 complex
107110586 (PRPF19)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
U-box type E3
107110586 (PRPF19)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
107110586 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
U-box
PROPPIN
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
RMC1_N
Cytochrom_D1
zf-Nse
ATG16
Motif
Other DBs
NCBI-GeneID:
107110586
NCBI-ProteinID:
XP_015266871
LinkDB
All DBs
Position
Un
AA seq
573 aa
AA seq
DB search
MAPASTHTGPATNSVPAKPCSHIASHRLQQSCGPRGSLACFTVRREGSNRPHRAASSGRR
GEQVSGGGGAEPATAVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQ
LIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHD
AACRVIARLTKEVTAAREALATLKPQAGLIVPQAAPSLQPNAVGAVEPMDLGELAGMTPE
IIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCP
SDTNRILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSHELVFSASPDATIRIW
SVPSASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGC
ALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA
DDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQVYICKQWTEVLHF
TEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccagcacccacacagggcccgccaccaactccgttcctgccaagccgtgc
tcccacatcgccagccaccgcctccagcagtcctgcgggcctcggggcagcctggcctgc
ttcaccgtgaggagagagggcagcaacaggccccaccgcgctgcttcttccggccgccgg
ggggagcaggtgagtggtggcggcggtgctgagccagccactgcggtttctaatgaggtg
cctgagcatccctgtgtgtctccagtctcgaaccatgtctatgagcgaagactgattgaa
aagtatattgcagagaatggaactgacccagtgaacaaccagccattgtctgaagagcag
ctcatagacattaaagttgcccacccaattcgaccaaagccaccctctgctactagcatc
ccagcaattctgaaggcacttcaagatgaatgggatgctgtcatgctgcatagtttcaca
ctgcggcagcagttgcagaccacacgccaggaactctctcatgctctgtaccagcatgat
gctgcctgccgtgtcattgcccgtctcaccaaagaggtcactgctgcgagagaagctctg
gcaactctgaagccacaggctggtctcattgtcccccaggctgcaccttctttgcagccc
aatgctgtgggtgctgttgagccaatggacttgggagaactggcaggaatgaccccagag
attatccagaagcttcaagacaaagccacagttctgaccacggagcgtaaaaagagagga
aagactgtgccggaggaactggtgaagcctgaagaactaagcaagtaccggcaggtggct
tcacatgtgggactgcacagtgccagcatcccaggcatcctggctctcgacctgtgtcct
tccgacaccaacaggatcctcacaggaggggcggataaaaatgttgttgtgtttgacaag
agctcggagcagatcctggcaactctcaagggtcacaccaagaaggtcactagtgtcgtg
tttcacccatcccatgagctcgtgttctcggcttctccagatgccactatccggatctgg
tcagtccccagtgcgtcatgtgtgcaagttgtgcgtgcccatgagagtgctgtgacaggg
ctgagtctccatgccacaggtgactatctgctgagctcctctgatgaccagtattgggcc
ttctctgacatccagactggccgtgtcctcaccaaggtcacagatgaaacttctggctgt
gctctcacctgtgctcagttccatcctgatgggcttatttttggaacagggactatggac
tctcagatcaagatttgggacttgaaggaacggactaatgtggcaaacttcccagggcat
tcgggccctattaccagcattgccttctctgagaatggttactacctggccactgcagcg
gacgactcgtctgtcaaactgtgggatctgcgcaaactgaagaacttcaagacactgcag
ctggacaataattttgaggtgaaatctctcatatttgaccagagtggcacttatctggcc
ctgggtggcactgatgtccaggtgtatatctgtaaacagtggacagaggttctccacttc
acagagcatagcggcttgacaacaggagtggcctttgggcaccatgctaaatttattgct
tctacaggcatggacagaagcctgaaattctacagcctgtag
DBGET
integrated database retrieval system
