Gekko japonicus (Schlegel's Japanese gecko): 107111052
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Entry
107111052 CDS
T04299
Symbol
SYVN1
Name
(RefSeq) synoviolin 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04120
Ubiquitin mediated proteolysis
gja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107111052 (SYVN1)
04120 Ubiquitin mediated proteolysis
107111052 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107111052 (SYVN1)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107111052 (SYVN1)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107111052 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107111052
NCBI-ProteinID:
XP_015267435
LinkDB
All DBs
Position
Un
AA seq
626 aa
AA seq
DB search
MFRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEAGQQPPAHQT
PLIPQPPNFPQGVLPPFPPGMFPLWPPMGPFPPVPGAQPPNNADNASAAPSTSGTQPAAG
TSRPSGGSASGSDSTAPTGTVPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEELR
AMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRSAPPPSAPATSASSQ
ETASAEPSTSEPTTFQSADSTTSAAVVPDSSTQAAPSPEAGAEGYTAPTGPPEQDDEPSS
LEEPDTAELRRRRLQKLELPSSSSSH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatggctgccagcctggccttgacctctgctgtagtggct
catgcctattacctgaagcaccagttctacccgacggtagtgtacctgaccaagtccagt
cccagcatggcggttctatacattcaagcttttgtcctggtgttcctgttaggcaaattc
atgggcaaagtgttttttggacagctgcgagcagcggaaatggagcatctgcttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggatgacttcagc
cctcgttttgtggcccttttcacactcctgctctttctcaagtgcttccactggctggca
gaagaccgggtggactttatggagaggagtccaaacatttcctggctcttccatttccgc
attgtctctctgatgttgctgttgggcatcctggatttcttgtttgtcaaccacgcctac
cacagtatcctcacacggggagcttccgtccagctggtgtttgggtttgaatatgccatc
ctcatgacaatggtgctcaccatcttcatcaaatacatcctgcactccatcgacctccag
agtgagaatccctgggacaacaaggcagtgtacatgctttacacagaactcttcacaggt
ttcatcaaggtgttgctgtacatggccttcatgaccatcatgatcaaagtacataccttc
ccgctgtttgctatccggcccatgtacctggctatgagacagttcaaaaaggctgtgaca
gatgccatcatgtcccgccgggccatacgcaacatgaacaccctgtatcctgatgccacc
ccagaagagctgcaggccatggacaatgtgtgtattatctgtcgggaggagatggtgaca
ggtgctaaacgcctaccttgcaaccacatattccacaccagctgcctgcggtcatggttc
cagcgccagcaaacctgccccacgtgccggatggatgtcctccgtgcctccctcccaact
cagtcccagacgccccctgagcagcaggaggcagggcagcagccgccagcacaccagact
ccgctgattcctcagccacctaattttccccaaggcgtcctgcctccttttccacctggg
atgtttccgttgtggccccccatgggcccatttcctccagtgcctggtgcccagccaccc
aacaacgcagataacgcttcagctgctccttccacatcagggacgcaacccgcagcaggc
acttcacggcccagtggaggctcagcatctggatcagactccactgcccctacaggaaca
gtgccaggtttccccttccctccaccttggatggggatgcccttcccccctctctttggt
ttccctcctatgccggttccgccctccgggtttgcaggactgactgaagaagagctgcga
gccatggaaggccatgaacggcagcacttggaagcccggctccagtgcttgcagaacatt
cacacgctcctcgatgcggccatgttgcagatcaaccagtatctcacagtcctggccact
attgggacgccccgctctgcaccaccaccaagcgctccagccacttcagcatcctctcag
gagactgccagtgcagagcccagcaccagcgaacccaccactttccagtccgctgacagc
actacttcggcagcagtggtcccagattcctcaacccaagcagctccttccccagaggca
ggcgctgagggttacacagccccaaccggtcctcctgagcaagatgacgagccctcttcc
ctggaggagccggatacagcagagctgcgcaggcgtcgccttcaaaaactggaactgccc
tcctcctcctcttctcattga
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